RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 MAF1Q9H063 256 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 MYOZ2Q9NPC6 264 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 KIF13BQ9NQT8 1826 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 KCND1Q9NSA2 647 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 DDX25Q9UHL0 483 aaKnown RBP11.22□□□□□ -0.61
PRPF3-206ENST00000493553 GJA3Q9Y6H8 435 aa11.22□□□□□ -0.61
PRPF3-206ENST00000493553 PSME4Q14997 1843 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 C2CD2LO14523 706 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 OIP5O43482 229 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 RHOBTB3O94955 611 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 KIF20AO95235 890 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.61
PRPF3-206ENST00000493553 ZNF18P17022 549 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 CAP2P40123 477 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 MARSP56192 900 aaKnown RBP11.21□□□□□ -0.61
PRPF3-206ENST00000493553 CTBSQ01459 385 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 PAK1Q13153 545 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 PSMD2Q13200 908 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 IL17AQ16552 155 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 NOM1Q5C9Z4 860 aaKnown RBP11.21□□□□□ -0.61
PRPF3-206ENST00000493553 DNTTIP2Q5QJE6 756 aaKnown RBP11.21□□□□□ -0.61
PRPF3-206ENST00000493553 SH3PXD2AQ5TCZ1 1133 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 HAUS3Q68CZ6 603 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 TTBK2Q6IQ55 1244 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 SV2BQ7L1I2 683 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 FCHSD1Q86WN1 690 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 IQCDQ96DY2 449 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 MBOAT7Q96N66 472 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 TMEM60Q9H2L4 133 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 VCPKMTQ9H867 229 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 VEZTQ9HBM0 779 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 FANCLQ9NW38 375 aa11.21□□□□□ -0.61
PRPF3-206ENST00000493553 MAP3K20Q9NYL2 800 aaKnown RBP11.21□□□□□ -0.61
PRPF3-206ENST00000493553 GDF2Q9UK05 429 aaPredicted RBP11.21□□□□□ -0.61
PRPF3-206ENST00000493553 MRPL11Q9Y3B7 192 aaKnown RBP11.21□□□□□ -0.61
PRPF3-206ENST00000493553 SCN9AQ15858 1988 aa11.21□□□□□ -0.62
PRPF3-206ENST00000493553 A0A087X0B3 334 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 GDF11O95390 407 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 MAPTP10636 758 aaKnown RBP11.2□□□□□ -0.62
PRPF3-206ENST00000493553 BMP6P22004 513 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 GSK3AP49840 483 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 CUL4BQ13620 913 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 TRIM14Q14142 442 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 KARSQ15046 597 aaKnown RBP11.2□□□□□ -0.62
PRPF3-206ENST00000493553 SPECC1LQ69YQ0 1117 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 FILIP1Q7Z7B0 1213 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 SIAH1Q8IUQ4 282 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 VSTM4Q8IW00 320 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 ANO3Q9BYT9 981 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 CPVLQ9H3G5 476 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 EXOC1Q9NV70 894 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 PCDHA12Q9UN75 941 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 EP400Q96L91 3159 aa11.2□□□□□ -0.62
PRPF3-206ENST00000493553 CNTNAP1P78357 1384 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 ABCB11O95342 1321 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 CLRN2A0PK11 232 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 GOLGA6L9A6NEM1 432 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 LRRC10BA6NIK2 292 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 FOXN1O15353 648 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
PRPF3-206ENST00000493553 ZBTB7AO95365 584 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 CYP3A4P08684 503 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 SKILP12757 684 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 PLCG1P19174 1290 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 EEF1GP26641 437 aaKnown RBP11.19□□□□□ -0.62
PRPF3-206ENST00000493553 CIITAP33076 1130 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 SLC16A2P36021 539 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 SREBF1P36956 1147 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 TXKP42681 527 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 USP14P54578 494 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 Q4G0T1 1027 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 CDKAL1Q5VV42 579 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 ISM2Q6H9L7 571 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 TMC6Q7Z403 805 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
PRPF3-206ENST00000493553 GOLGA6L1Q8N7Z2 621 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
PRPF3-206ENST00000493553 CCDC51Q96ER9 411 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 SCARF2Q96GP6 870 aaPredicted RBP11.19□□□□□ -0.62
PRPF3-206ENST00000493553 ZMYND15Q9H091 742 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 PPP2R3BQ9Y5P8 575 aa11.19□□□□□ -0.62
PRPF3-206ENST00000493553 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
PRPF3-206ENST00000493553 WNT10BO00744 389 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
PRPF3-206ENST00000493553 PPP1R11O60927 126 aaPredicted RBP11.18□□□□□ -0.62
PRPF3-206ENST00000493553 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 MUTP22033 750 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 TECP42680 631 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 ARHGAP4P98171 946 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 LAMC2Q13753 1193 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 NAALADL2Q58DX5 795 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 HYIQ5T013 277 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 PPFIBP1Q86W92 1011 aa11.18□□□□□ -0.62
PRPF3-206ENST00000493553 GRAMD1CQ8IYS0 662 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms