RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 RFC4P35249 363 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 FSTL1Q12841 308 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 LRRFIP1Q32MZ4 808 aaKnown RBP5.97□□□□□ -1.45
CLIP4-212ENST00000493551 DALRD3Q5D0E6 543 aaKnown RBP5.97□□□□□ -1.45
CLIP4-212ENST00000493551 PLEKHH3Q7Z736 793 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 SMC1BQ8NDV3 1235 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 DHRS1Q96LJ7 313 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 GORASP1Q9BQQ3 440 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 CD248Q9HCU0 757 aa5.97□□□□□ -1.45
CLIP4-212ENST00000493551 SUCOQ9UBS9 1254 aaKnown RBP5.97□□□□□ -1.45
CLIP4-212ENST00000493551 SUPT16HQ9Y5B9 1047 aaKnown RBP5.97□□□□□ -1.45
CLIP4-212ENST00000493551 MEIS3P2A8K0S8 358 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 FOXN1O15353 648 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 GYS1P13807 737 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 TGFB2P61812 414 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 DDR1Q08345 913 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 MCTP2Q6DN12 878 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 FBXL19Q6PCT2 694 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 TMC4Q7Z404 712 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 FCRL3Q96P31 734 aaPredicted RBP5.96□□□□□ -1.46
CLIP4-212ENST00000493551 C11orf84Q9BUA3 381 aaPredicted RBP5.96□□□□□ -1.46
CLIP4-212ENST00000493551 PPP4R1LQ9P1A2 415 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 ING1Q9UK53 422 aaPredicted RBP5.96□□□□□ -1.46
CLIP4-212ENST00000493551 NSD3Q9BZ95 1437 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 C4AP0C0L4 1744 aa5.96□□□□□ -1.46
CLIP4-212ENST00000493551 PLEKHG2Q9H7P9 1386 aa5.95□□□□□ -1.46
CLIP4-212ENST00000493551 C8BP07358 591 aa5.95□□□□□ -1.46
CLIP4-212ENST00000493551 TNNT2P45379 298 aaPredicted RBP5.95□□□□□ -1.46
CLIP4-212ENST00000493551 NOL9Q5SY16 702 aaKnown RBP5.95□□□□□ -1.46
CLIP4-212ENST00000493551 PALM2Q8IXS6 379 aa5.95□□□□□ -1.46
CLIP4-212ENST00000493551 REXO1Q8N1G1 1221 aaKnown RBP5.95□□□□□ -1.46
CLIP4-212ENST00000493551 LZTR1Q8N653 840 aa5.95□□□□□ -1.46
CLIP4-212ENST00000493551 KYQ8NBH2 561 aa5.95□□□□□ -1.46
CLIP4-212ENST00000493551 TXNDC5Q8NBS9 432 aaKnown RBP5.95□□□□□ -1.46
CLIP4-212ENST00000493551 LCORQ96JN0 433 aaPredicted RBP5.95□□□□□ -1.46
CLIP4-212ENST00000493551 RTL1A6NKG5 1358 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 NPEPPSL1A6NEC2 478 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 C9IYK1 514 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 FYB1O15117 783 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 GREM1O60565 184 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 ZNF585AQ6P3V2 769 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 GK5Q6ZS86 529 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 DNERQ8NFT8 737 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 SLC9A7Q96T83 725 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 POLR3GLQ9BT43 218 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 DEF6Q9H4E7 631 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 SF3B6Q9Y3B4 125 aaKnown RBP5.94□□□□□ -1.46
CLIP4-212ENST00000493551 FHOD1Q9Y613 1164 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 MAP2P11137 1827 aaKnown RBP5.94□□□□□ -1.46
CLIP4-212ENST00000493551 TNRC6CQ9HCJ0 1690 aaKnown RBP5.94□□□□□ -1.46
CLIP4-212ENST00000493551 CGNL1Q0VF96 1302 aa5.94□□□□□ -1.46
CLIP4-212ENST00000493551 INSRP06213 1382 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 FLT4P35916 1363 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 KIF13BQ9NQT8 1826 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 ST20-MTHFSA0A0A6YYL1 179 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 C9orf118A6NHY6 69 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 CD3EP07766 207 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 IFNGR1P15260 489 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 VEGFAP15692 232 aaPredicted RBP5.93□□□□□ -1.46
CLIP4-212ENST00000493551 PHKG2P15735 406 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 SELENOPP49908 381 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 LBX1P52954 281 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 ZNF445P59923 1031 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 CLCQ05315 142 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 GRM1Q13255 1194 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 ANKRD39Q53RE8 183 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 CIR1Q86X95 450 aaPredicted RBP5.93□□□□□ -1.46
CLIP4-212ENST00000493551 TTLL6Q8N841 843 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 SEMA4AQ9H3S1 761 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 KBTBD4Q9NVX7 518 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 C11orf21Q9P2W6 132 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 FBLN5Q9UBX5 448 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 RWDD3Q9Y3V2 267 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 LTBP3Q9NS15 1303 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 KDRP35968 1356 aa5.93□□□□□ -1.46
CLIP4-212ENST00000493551 BRCA1P38398 1863 aaKnown RBP5.92□□□□□ -1.46
CLIP4-212ENST00000493551 TIAM2Q8IVF5 1701 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 CCDC85CA6NKD9 419 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 MUSKO15146 869 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 B4GALT3O60512 393 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 RPS6KA4O75676 772 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 ACRP10323 421 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 EIF4A3P38919 411 aaKnown RBP5.92□□□□□ -1.46
CLIP4-212ENST00000493551 CRKP46108 304 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 CRKLP46109 303 aaKnown RBP5.92□□□□□ -1.46
CLIP4-212ENST00000493551 PURAQ00577 322 aaKnown RBP5.92□□□□□ -1.46
CLIP4-212ENST00000493551 POU4F1Q01851 419 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 SMN1Q16637 294 aaKnown RBP5.92□□□□□ -1.46
CLIP4-212ENST00000493551 WWC2Q6AWC2 1192 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 ETV3LQ6ZN32 361 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 FIBCD1Q8N539 461 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 BRF1Q92994 677 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 SYT3Q9BQG1 590 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 GP6Q9HCN6 339 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 TCAF1Q9Y4C2 921 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 CARMIL3Q8ND23 1372 aa5.92□□□□□ -1.46
CLIP4-212ENST00000493551 GLTPD2A6NH11 291 aa5.91□□□□□ -1.46
CLIP4-212ENST00000493551 POLRMTO00411 1230 aaKnown RBP5.91□□□□□ -1.46
CLIP4-212ENST00000493551 DDX3XO00571 662 aaKnown RBP eCLIP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms