RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 C11orf49Q9H6J7 331 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 ZSWIM4Q9H7M6 989 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 ELP3Q9H9T3 547 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 FBXO40Q9UH90 709 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 LIMA1Q9UHB6 759 aaKnown RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 TULP2O00295 520 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 EDIL3O43854 480 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 TBC1D8O95759 1140 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 CCDC175P0C221 793 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 SPAG1Q07617 926 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 PLEKHH3Q7Z736 793 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 SNX29Q8TEQ0 813 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 PCMTD1Q96MG8 357 aaPredicted RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 RANBP17Q9H2T7 1088 aaKnown RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 PSTPIP2Q9H939 334 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 HOXC10Q9NYD6 342 aa7.79□□□□□ -1.16
HERC4-211ENST00000492996 MAGEC2Q9UBF1 373 aaPredicted RBP7.79□□□□□ -1.16
HERC4-211ENST00000492996 PFASO15067 1338 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 B4DLN1 442 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 TRPA1O75762 1119 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 RHOBTB3O94955 611 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 ABL1P00519 1130 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 CASQ1P31415 396 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 ERVK-9P63128 1117 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 ERVK-24P63145 666 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 RAD51AP2Q09MP3 1159 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 GRB10Q13322 594 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 USH1GQ495M9 461 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 SPICE1Q8N0Z3 855 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 GIMAP8Q8ND71 665 aaPredicted RBP7.78□□□□□ -1.16
HERC4-211ENST00000492996 CCDC47Q96A33 483 aaKnown RBP7.78□□□□□ -1.16
HERC4-211ENST00000492996 AK8Q96MA6 479 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 DRC1Q96MC2 740 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 PANX2Q96RD6 677 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 VCPKMTQ9H867 229 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 L2HGDHQ9H9P8 463 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 SQORQ9Y6N5 450 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 MICAL3Q7RTP6 2002 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 ESYT2A0FGR8 921 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 MYMKA6NI61 221 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 ADAMTS4O75173 837 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 LRRC41Q15345 812 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 TMEM266Q2M3C6 531 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 QRICH1Q2TAL8 776 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 FAM26DQ5JW98 314 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 SLFN13Q68D06 897 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 ANKRD40Q6AI12 368 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 FBXO38Q6PIJ6 1188 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 SV2BQ7L1I2 683 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 KCNK18Q7Z418 384 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 FCHSD1Q86WN1 690 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 CNGA4Q8IV77 575 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 CHP1Q99653 195 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 SLF1Q9BQI6 1058 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 PICK1Q9NRD5 415 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 CEP83Q9Y592 693 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 PCDHA1Q9Y5I3 950 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 ADGRG1Q9Y653 693 aa7.78□□□□□ -1.16
HERC4-211ENST00000492996 SPDYE16A6NNV3 312 aaPredicted RBP7.77□□□□□ -1.16
HERC4-211ENST00000492996 ZBTB5O15062 677 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 MTIF2P46199 727 aaKnown RBP7.77□□□□□ -1.16
HERC4-211ENST00000492996 KLK7P49862 253 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 MRPL12P52815 198 aaKnown RBP7.77□□□□□ -1.16
HERC4-211ENST00000492996 KCNB1Q14721 858 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 ARHGAP29Q52LW3 1261 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 TTI2Q6NXR4 508 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 XRRA1Q6P2D8 792 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 GOLGA6L1Q8N7Z2 621 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 PHOSPHO2Q8TCD6 241 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 CUL5Q93034 780 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 MTMR9Q96QG7 549 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 NCAPGQ9BPX3 1015 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 BLOC1S4Q9NUP1 217 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 SLC5A4Q9NY91 659 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 TBC1D7Q9P0N9 293 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 DDX25Q9UHL0 483 aaKnown RBP7.77□□□□□ -1.16
HERC4-211ENST00000492996 FEM1BQ9UK73 627 aa7.77□□□□□ -1.16
HERC4-211ENST00000492996 PHLPP2Q6ZVD8 1323 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 TTC26A0AVF1 554 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 CLRN2A0PK11 232 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 LRRC10BA6NIK2 292 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 STAM2O75886 525 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 ZNF865P0CJ78 1059 aaPredicted RBP7.77□□□□□ -1.17
HERC4-211ENST00000492996 HERVK_113P62684 666 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 CACNB1Q02641 598 aaPredicted RBP7.77□□□□□ -1.17
HERC4-211ENST00000492996 ICA1Q05084 483 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 GPATCH4Q5T3I0 446 aaKnown RBP7.77□□□□□ -1.17
HERC4-211ENST00000492996 KRT79Q5XKE5 535 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 GLIS3Q8NEA6 775 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 UBXN4Q92575 508 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 LARP4BQ92615 738 aaKnown RBP7.77□□□□□ -1.17
HERC4-211ENST00000492996 P2RX5Q93086 422 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 PNMA5Q96PV4 448 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 DUSP9Q99956 384 aaKnown RBP7.77□□□□□ -1.17
HERC4-211ENST00000492996 PLCD4Q9BRC7 762 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 RIC8AQ9NPQ8 531 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 ABHD10Q9NUJ1 306 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 DDX20Q9UHI6 824 aaKnown RBP7.77□□□□□ -1.17
HERC4-211ENST00000492996 KIAA1549LQ6ZVL6 1849 aa7.77□□□□□ -1.17
HERC4-211ENST00000492996 DOCK5Q9H7D0 1870 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms