RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 OPLAHO14841 1288 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 PPP1R11O60927 126 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 NBNO60934 754 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 GJB5O95377 273 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 PARNO95453 639 aaKnown RBP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 GGPS1O95749 300 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 CXCL10P02778 98 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 NR3C2P08235 984 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 POU3F3P20264 500 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 UBA1P22314 1058 aaKnown RBP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 HOXA13P31271 388 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 HSD17B4P51659 736 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 NUCB1Q02818 461 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 PTK7Q13308 1070 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 AAMPQ13685 434 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 LAMC2Q13753 1193 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 TCTN1Q2MV58 587 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 FAM117BQ6P1L5 589 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 STAG2Q8N3U4 1231 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 BANK1Q8NDB2 785 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 IL31RAQ8NI17 732 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 ANKS1AQ92625 1134 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 WNT8BQ93098 351 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 SPATA33Q96N06 139 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 PDCD2LQ9BRP1 358 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 RWDD1Q9H446 243 aaPredicted RBP8.36□□□□□ -1.07
SPTA1-208ENST00000492934 OSBPL3Q9H4L5 887 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 ZSWIM5Q9P217 1185 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 CTNNA3Q9UI47 895 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 COG5Q9UP83 839 aa8.36□□□□□ -1.07
SPTA1-208ENST00000492934 KIAA1217Q5T5P2 1943 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 ABHD14A-ACY1A0A1B0GW23 586 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 KLRF2D3W0D1 207 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 HAS3O00219 553 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 ZBTB5O15062 677 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 LPXNO60711 386 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 EFCAB14O75071 495 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 HOXD8P13378 290 aaPredicted RBP8.35□□□□□ -1.07
SPTA1-208ENST00000492934 CCND2P30279 289 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 ZNF200P98182 395 aaPredicted RBP8.35□□□□□ -1.07
SPTA1-208ENST00000492934 GPNMBQ14956 572 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 PGM5Q15124 567 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 TRIM71Q2Q1W2 868 aaKnown RBP8.35□□□□□ -1.07
SPTA1-208ENST00000492934 HSDL1Q3SXM5 330 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 ZNF618Q5T7W0 954 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 TGS1Q96RS0 853 aaKnown RBP8.35□□□□□ -1.07
SPTA1-208ENST00000492934 IL25Q9H293 177 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 MAD2L2Q9UI95 211 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 PCDHA1Q9Y5I3 950 aa8.35□□□□□ -1.07
SPTA1-208ENST00000492934 EMSYQ7Z589 1322 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 LINC01553A4QN01 128 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 GCOM1H8Y6P7 765 aaPredicted RBP8.34□□□□□ -1.07
SPTA1-208ENST00000492934 NOP56O00567 594 aaKnown RBP8.34□□□□□ -1.07
SPTA1-208ENST00000492934 LGR5O75473 907 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 CTSHP09668 335 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 POLR2MP0CAP2 368 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 THPOP40225 353 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.07
SPTA1-208ENST00000492934 GHRHRQ02643 423 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 TRDNQ13061 729 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 IKBKEQ14164 716 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 SEC23AQ15436 765 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 CELF3Q5SZQ8 465 aaKnown RBP8.34□□□□□ -1.07
SPTA1-208ENST00000492934 KCNV1Q6PIU1 500 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 CYB5R4Q7L1T6 521 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 FCHSD1Q86WN1 690 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 MYOCDQ8IZQ8 938 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 MTMR8Q96EF0 704 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 SCARF2Q96GP6 870 aaPredicted RBP8.34□□□□□ -1.07
SPTA1-208ENST00000492934 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
SPTA1-208ENST00000492934 PIGSQ96S52 555 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 RAD9AQ99638 391 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 C1QTNF1Q9BXJ1 281 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 MLXIPQ9HAP2 919 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 MYH6P13533 1939 aa8.34□□□□□ -1.07
SPTA1-208ENST00000492934 SIP14410 1827 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 TET1Q8NFU7 2136 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 PRRC2BQ5JSZ5 2229 aaKnown RBP8.33□□□□□ -1.08
SPTA1-208ENST00000492934 ERICH2A1L162 156 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 C17orf102A2RUQ5 167 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 PALM3A6NDB9 673 aaPredicted RBP8.33□□□□□ -1.08
SPTA1-208ENST00000492934 IFIT3O14879 490 aaKnown RBP8.33□□□□□ -1.08
SPTA1-208ENST00000492934 IGHDP01880 384 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 AMHP03971 560 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 LGALS2P05162 132 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 SMIM10L2AP0DMW4 78 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 SMIM10L2BP0DMW5 78 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 PLA2G5P39877 138 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 ERVK-21P61565 698 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 PTSQ03393 145 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 TRAF1Q13077 416 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 GRM4Q14833 912 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 SLC35G1Q2M3R5 365 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 GNPTABQ3T906 1256 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.33□□□□□ -1.08
SPTA1-208ENST00000492934 STOX1Q6ZVD7 989 aa8.33□□□□□ -1.08
SPTA1-208ENST00000492934 RALYLQ86SE5 291 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms