RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 UBE3AQ05086 875 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 SPOUT1Q5T280 376 aaKnown RBP15.75■□□□□ 0.11
GPNMB-213ENST00000492512 CATIPQ7Z7H3 387 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 RALYLQ86SE5 291 aaKnown RBP15.75■□□□□ 0.11
GPNMB-213ENST00000492512 SMC5Q8IY18 1101 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 ATOH1Q92858 354 aaPredicted RBP15.75■□□□□ 0.11
GPNMB-213ENST00000492512 ZBTB10Q96DT7 871 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
GPNMB-213ENST00000492512 PKD2L1Q9P0L9 805 aa15.75■□□□□ 0.11
GPNMB-213ENST00000492512 IGSF9BQ9UPX0 1349 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 AVPR2P30518 371 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 RBM10P98175 930 aaKnown RBP15.74■□□□□ 0.11
GPNMB-213ENST00000492512 MTMR1Q13613 665 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 SUSD6Q92537 303 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 TNPO1Q92973 898 aaKnown RBP15.74■□□□□ 0.11
GPNMB-213ENST00000492512 ASIC4Q96FT7 647 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 CELF4Q9BZC1 486 aaKnown RBP15.74■□□□□ 0.11
GPNMB-213ENST00000492512 TLR9Q9NR96 1032 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 AAASQ9NRG9 546 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 SEC63Q9UGP8 760 aaKnown RBP15.74■□□□□ 0.11
GPNMB-213ENST00000492512 TRPC6Q9Y210 931 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 PCDHB7Q9Y5E2 793 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
GPNMB-213ENST00000492512 MYO10Q9HD67 2058 aa15.74■□□□□ 0.11
GPNMB-213ENST00000492512 ITGB5P18084 799 aa15.73■□□□□ 0.11
GPNMB-213ENST00000492512 SARSP49591 514 aaKnown RBP15.73■□□□□ 0.11
GPNMB-213ENST00000492512 PTPN21Q16825 1174 aa15.73■□□□□ 0.11
GPNMB-213ENST00000492512 ZBTB33Q86T24 672 aa15.73■□□□□ 0.11
GPNMB-213ENST00000492512 ATP8B4Q8TF62 1192 aa15.73■□□□□ 0.11
GPNMB-213ENST00000492512 CDCA3Q99618 268 aaPredicted RBP15.73■□□□□ 0.11
GPNMB-213ENST00000492512 SPZ1Q9BXG8 430 aa15.73■□□□□ 0.11
GPNMB-213ENST00000492512 IL25Q9H293 177 aa15.73■□□□□ 0.11
GPNMB-213ENST00000492512 AZI2Q9H6S1 392 aa15.73■□□□□ 0.11
GPNMB-213ENST00000492512 FAM186AA6NE01 2351 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 FGF18O76093 207 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 SRGAP2BP0DMP2 458 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 NUCB1Q02818 461 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 NFX1Q12986 1120 aaKnown RBP15.72■□□□□ 0.11
GPNMB-213ENST00000492512 DUSP6Q16828 381 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 TMEM266Q2M3C6 531 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 PDE12Q6L8Q7 609 aaKnown RBP15.72■□□□□ 0.11
GPNMB-213ENST00000492512 VN1R2Q8NFZ6 395 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
GPNMB-213ENST00000492512 TRAPPC12Q8WVT3 735 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 TMX1Q9H3N1 280 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 RWDD1Q9H446 243 aaPredicted RBP15.72■□□□□ 0.11
GPNMB-213ENST00000492512 PSTPIP2Q9H939 334 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
GPNMB-213ENST00000492512 PCDHA2Q9Y5H9 948 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 UBIAD1Q9Y5Z9 338 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 MYO15AQ9UKN7 3530 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 EVPLQ92817 2033 aa15.72■□□□□ 0.11
GPNMB-213ENST00000492512 TBKBP1A7MCY6 615 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 H0Y858 1186 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 MAFGO15525 162 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 CYP21A2P08686 494 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 KIF5BP33176 963 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 ERVFC1P60507 584 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 KRT76Q01546 638 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 THNSL1Q8IYQ7 743 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 NME8Q8N427 588 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 NCOA7Q8NI08 942 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 PCYT2Q99447 389 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 JPH1Q9HDC5 661 aaPredicted RBP15.71■□□□□ 0.11
GPNMB-213ENST00000492512 TMEM260Q9NX78 707 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 SLC9A2Q9UBY0 812 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 PLXNA3P51805 1871 aa15.71■□□□□ 0.11
GPNMB-213ENST00000492512 KDM3AQ9Y4C1 1321 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 SMIM35A0A1B0GVV1 85 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 DENND3A2RUS2 1198 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 SPDYE3A6NKU9 549 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 E7EWF7 191 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 SP100P23497 879 aaPredicted RBP15.7■□□□□ 0.1
GPNMB-213ENST00000492512 SMARCA1P28370 1054 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 TECP42680 631 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 PLCB4Q15147 1175 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 ZNF654Q8IZM8 581 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 LZTS2Q9BRK4 669 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 JADE2Q9NQC1 790 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 GINS2Q9Y248 185 aa15.7■□□□□ 0.1
GPNMB-213ENST00000492512 RPS6KA5O75582 802 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 NUBP1P53384 320 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 FOXK2Q01167 660 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 UBE2SQ16763 222 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 FAM102BQ5T8I3 360 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 PLPP4Q5VZY2 271 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 ANKRD54Q6NXT1 300 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 MTHFD1LQ6UB35 978 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 TMEM184AQ6ZMB5 413 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 FAM43BQ6ZT52 329 aaPredicted RBP15.69■□□□□ 0.1
GPNMB-213ENST00000492512 SLC24A5Q71RS6 500 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 PLPPR4Q7Z2D5 763 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 COLGALT1Q8NBJ5 622 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 IGDCC4Q8TDY8 1250 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 RIPOR3Q96MK2 946 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 ADAM2Q99965 735 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 MYL10Q9BUA6 226 aa15.69■□□□□ 0.1
GPNMB-213ENST00000492512 APOL5Q9BWW9 433 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms