RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 GAS7O60861 476 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 PSAPP07602 524 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 PFKMP08237 780 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 RSPH10BP0C881 870 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 GCFC2P16383 781 aaKnown RBP8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 PBX2P40425 430 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 SLC26A2P50443 739 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 SPIRE1Q08AE8 756 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 MGAT3Q09327 533 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 MKRN4PQ13434 485 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 FAM160B1Q5W0V3 765 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 PDXDC2PQ6P474 469 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 MTHFD1LQ6UB35 978 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 POTEDQ86YR6 584 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 ATP8B4Q8TF62 1192 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 DNAJB3Q8WWF6 145 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 C8orf76Q96K31 380 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 FAM20AQ96MK3 541 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 CEP89Q96ST8 783 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 TEKT3Q9BXF9 490 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 BRMS1Q9HCU9 246 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 TUBE1Q9UJT0 475 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 TRPC6Q9Y210 931 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 PCDHA2Q9Y5H9 948 aa8.12□□□□□ -1.11
PDLIM1-204ENST00000492511 TBX3O15119 743 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 CAND2O75155 1236 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 PARNO95453 639 aaKnown RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 CTSHP09668 335 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 KLRC1P26715 233 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 SFNP31947 248 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 MCM2P49736 904 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 PPP2R5CQ13362 524 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 CUL4AQ13619 759 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 TRIM29Q14134 588 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 PLEKHG4Q58EX7 1191 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 ZNF484Q5JVG2 852 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 TAF2Q6P1X5 1199 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 TRMT1LQ7Z2T5 733 aaKnown RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 MIER3Q7Z3K6 550 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 KIAA0319LQ8IZA0 1049 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 FAM184AQ8NB25 1140 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 DBF4BQ8NFT6 615 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 RDM1Q8NG50 284 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 BBXQ8WY36 941 aaPredicted RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 MTMR9Q96QG7 549 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 PBX4Q9BYU1 374 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 TMEM60Q9H2L4 133 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 TTYH1Q9H313 450 aaPredicted RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 FOXP1Q9H334 677 aaPredicted RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 WRAP73Q9P2S5 460 aaPredicted RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 YBX2Q9Y2T7 364 aaKnown RBP8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 SAMM50Q9Y512 469 aa8.11□□□□□ -1.11
PDLIM1-204ENST00000492511 UNC80Q8N2C7 3258 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 SMIM35A0A1B0GVV1 85 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 TMEM150BA6NC51 233 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 ZBBXA8MT70 800 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 C22orf31O95567 290 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 OATP04181 439 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 MYOGP15173 224 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 ATP2B1P20020 1258 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 GJB2P29033 226 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 TOB1P50616 345 aaPredicted RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 JAK3P52333 1124 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 RABGGTBP53611 331 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 PRKCEQ02156 737 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 TMEM62Q0P6H9 643 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 TARBP2Q15633 366 aaKnown RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 CNKSR3Q6P9H4 555 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 TMCO2Q7Z6W1 182 aaPredicted RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 NOSTRINQ8IVI9 506 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 LINC01465Q8N7H1 131 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 C4orf32Q8N8J7 132 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 BANK1Q8NDB2 785 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 SYMPKQ92797 1274 aaKnown RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 TNPO1Q92973 898 aaKnown RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 NAP1L4Q99733 375 aaKnown RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 NIFKQ9BYG3 293 aaKnown RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 FAM49AQ9H0Q0 323 aaPredicted RBP8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 SEMA6BQ9H3T3 888 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 CDHR5Q9HBB8 845 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 SLC4A7Q9Y6M7 1214 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 COL1A2P08123 1366 aa8.1□□□□□ -1.11
PDLIM1-204ENST00000492511 ABHD14A-ACY1A0A1B0GW23 586 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 ZBTB39O15060 712 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 BAIAP3O94812 1187 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 ACTN1P12814 892 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 ATP2A2P16615 1042 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 DNAJB2P25686 324 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 DEFB103AP81534 67 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 MRPS6P82932 125 aaKnown RBP8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 NBR1Q14596 966 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 LPIN1Q14693 890 aa8.09□□□□□ -1.11
PDLIM1-204ENST00000492511 EPHA7Q15375 998 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms