RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 MCPH1Q8NEM0 835 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 CCDC43Q96MW1 224 aaKnown RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 GPR20Q99678 358 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 MTRQ99707 1265 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 NIFKQ9BYG3 293 aaKnown RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 GZF1Q9H116 711 aaPredicted RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 SMARCAD1Q9H4L7 1026 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 ZNF302Q9NR11 478 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 OLFML3Q9NRN5 406 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 NRBP2Q9NSY0 501 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 FAM184BQ9ULE4 1060 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 COL4A3BPQ9Y5P4 624 aa10.75□□□□□ -0.69
USP54-214ENST00000492357 MYH9P35579 1960 aaKnown RBP10.75□□□□□ -0.69
USP54-214ENST00000492357 GSTTP1A0A1W2PQM5 241 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ARHGEF35A5YM69 484 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 GOLGA6L3A6NEY3 463 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 A6NJR5 290 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 E9PMD0 336 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 IKBKBO14920 756 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 DGAT1O75907 488 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ZNF865P0CJ78 1059 aaPredicted RBP10.74□□□□□ -0.69
USP54-214ENST00000492357 AKR1A1P14550 325 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 CYP11B2P19099 503 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 YWHABP31946 246 aaKnown RBP10.74□□□□□ -0.69
USP54-214ENST00000492357 RFC5P40937 340 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 AFMP43652 599 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 FLT3LGP49771 235 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 MRE11P49959 708 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ZNF131P52739 623 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 C1QTNF8P60827 252 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ASIC1P78348 528 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 CYP4A11Q02928 519 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 TNFAIP2Q03169 654 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ARHGAP1Q07960 439 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 EHHADHQ08426 723 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ALCAMQ13740 583 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 MCM6Q14566 821 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ECM1Q16610 540 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
USP54-214ENST00000492357 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
USP54-214ENST00000492357 DDX12PQ92771 950 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 GJA10Q969M2 543 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 DNAJC19Q96DA6 116 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 SPATA33Q96N06 139 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 BHMT2Q9H2M3 363 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 EXOC1Q9NV70 894 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 RGL1Q9NZL6 768 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ZNF215Q9UL58 517 aaPredicted RBP10.74□□□□□ -0.69
USP54-214ENST00000492357 PHLPP2Q6ZVD8 1323 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 COL1A2P08123 1366 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 DOCK3Q8IZD9 2030 aa10.74□□□□□ -0.69
USP54-214ENST00000492357 ARID2Q68CP9 1835 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 MYMKA6NI61 221 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 SMTNL1A8MU46 457 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 H0YCG3 227 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 DDX39AO00148 427 aaKnown RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 BACH1O14867 736 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 KLRC4O43908 158 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 MSCO60682 206 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 DUSP11O75319 330 aaKnown RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 ARIH2O95376 493 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 TBC1D8O95759 1140 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 HMGCRP04035 888 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 OATP04181 439 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 CAPN2P17655 700 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 CYP2B6P20813 491 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 TCF7P36402 384 aaPredicted RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 RARRES1P49788 294 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 ZNF165P49910 485 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 CPT1AP50416 773 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 STAT5BP51692 787 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 TPM4P67936 248 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 CUL4BQ13620 913 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 CTTNQ14247 550 aaKnown RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 LY6KQ17RY6 165 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 CCDC144BQ3MJ40 725 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 RINT1Q6NUQ1 792 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 SWSAP1Q6NVH7 229 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 STXBP4Q6ZWJ1 553 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 C1orf186Q6ZWK4 172 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 KCNK18Q7Z418 384 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 GPBP1Q86WP2 473 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 CCDC60Q8IWA6 550 aaPredicted RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 LRRC15Q8TF66 581 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 DRC1Q96MC2 740 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 ERAP1Q9NZ08 941 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 LARSQ9P2J5 1176 aaKnown RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 GABBR1Q9UBS5 961 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 MAN1B1Q9UKM7 699 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
USP54-214ENST00000492357 UBE4BO95155 1302 aa10.73□□□□□ -0.69
USP54-214ENST00000492357 FOXN1O15353 648 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 SEPT4O43236 478 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 HBP1O60381 514 aa10.72□□□□□ -0.69
USP54-214ENST00000492357 TBCAO75347 108 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms