RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
CACNA1C-228ENST00000492150 SORBS3O60504 671 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 CFBP00751 764 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 HOXC8P31273 242 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 MTHFRP42898 656 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 SP2Q02086 613 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 GHRHRQ02643 423 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 TDGQ13569 410 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 HSDL1Q3SXM5 330 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 ASPRV1Q53RT3 343 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 CCDC178Q5BJE1 867 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 CELF3Q5SZQ8 465 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 PDCD2LQ9BRP1 358 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 C16orf70Q9BSU1 422 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 OSBPL7Q9BZF2 842 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 WNT16Q9UBV4 365 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 FBXL21Q9UKT6 434 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
CACNA1C-228ENST00000492150 ZNF213O14771 459 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 FSCN2O14926 492 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 GGPS1O95749 300 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 MYCLP12524 364 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 STOX1Q6ZVD7 989 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 IQCA1Q86XH1 822 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 IL31RAQ8NI17 732 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 MICAL1Q8TDZ2 1067 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 SPATA33Q96N06 139 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 ZSCAN10Q96SZ4 725 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 EPC1Q9H2F5 836 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 CYP26B1Q9NR63 512 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 PCDHGA2Q9Y5H1 932 aa13.58□□□□□ -0.24
CACNA1C-228ENST00000492150 PATJQ8NI35 1801 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 B4E1Z4 1266 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 PPP1R11O60927 126 aaPredicted RBP13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 PARP1P09874 1014 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 FAM26DQ5JW98 314 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 KCNV1Q6PIU1 500 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 STAG2Q8N3U4 1231 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 CASP10Q92851 521 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 AMNQ9BXJ7 453 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 BCAS3Q9H6U6 928 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 ZSWIM5Q9P217 1185 aa13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 SMG5Q9UPR3 1016 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-228ENST00000492150 MYH6P13533 1939 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 C17orf102A2RUQ5 167 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 TAF4O00268 1085 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 TREHO43280 583 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 EOMESO95936 686 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 SDSP20132 328 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 HOXA13P31271 388 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 NT5C2P49902 561 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 PGM5Q15124 567 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 MAML2Q8IZL2 1156 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 ATP6V0A1Q93050 837 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 MTMR8Q96EF0 704 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 ZFP91Q96JP5 570 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 PARD6AQ9NPB6 346 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 MAP3K20Q9NYL2 800 aaKnown RBP13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 CDH22Q9UJ99 828 aa13.56□□□□□ -0.24
CACNA1C-228ENST00000492150 MIA3Q5JRA6 1907 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 HELZ2Q9BYK8 2649 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 KRBA1A5PL33 1030 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 H3BRB1 525 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 ENPP3O14638 875 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 LGALS2P05162 132 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 CTSHP09668 335 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 SMIM10L2AP0DMW4 78 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 SMIM10L2BP0DMW5 78 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 TGFB3P10600 412 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 MFAP1P55081 439 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 SLC35G1Q2M3R5 365 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 KIAA1841Q6NSI8 718 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 UNQ6494/PRO21346Q6UXR6 183 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 TUT1Q9H6E5 874 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 FBXO4Q9UKT5 387 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
CACNA1C-228ENST00000492150 LOXHD1Q8IVV2 1947 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 STK25O00506 426 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 ZBTB5O15062 677 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 TBC1D4O60343 1298 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 LILRB5O75023 590 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 ERVFC1P60507 584 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 HDAC1Q13547 482 aaPredicted RBP13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 ZBTB44Q8NCP5 570 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 TBC1D17Q9HA65 648 aa13.54□□□□□ -0.24
CACNA1C-228ENST00000492150 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms