RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	LGR5	O75473	907 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	MBD3	O95983	291 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	SSB	P05455	408 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
TRO-223	ENST00000492142	MMP3	P08254	477 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	MYL3	P08590	195 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	C6orf222	P0C671	652 aa	Predicted RBP	10.9	□□□□□ -0.66
TRO-223	ENST00000492142	GJA9	P57773	515 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	MTFR1	Q15390	333 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	PKN2	Q16513	984 aa	Known RBP	10.9	□□□□□ -0.66
TRO-223	ENST00000492142	FSCN1	Q16658	493 aa	Known RBP	10.9	□□□□□ -0.66
TRO-223	ENST00000492142	DGKD	Q16760	1214 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	BRDT	Q58F21	947 aa	Predicted RBP	10.9	□□□□□ -0.66
TRO-223	ENST00000492142	HYI	Q5T013	277 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	TRIM50	Q86XT4	487 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	CKAP2L	Q8IYA6	745 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	PIGO	Q8TEQ8	1089 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	LRRC15	Q8TF66	581 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	ATP6V0A1	Q93050	837 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	NACC1	Q96RE7	527 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.9	□□□□□ -0.66
TRO-223	ENST00000492142	NT5C3A	Q9H0P0	336 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	SPC25	Q9HBM1	224 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	XPNPEP3	Q9NQH7	507 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	DNM3	Q9UQ16	869 aa		10.9	□□□□□ -0.66
TRO-223	ENST00000492142	WDR81	Q562E7	1941 aa		10.9	□□□□□ -0.67
TRO-223	ENST00000492142	SYNRG	Q9UMZ2	1314 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	TMEM150B	A6NC51	233 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	CTAGE5	O15320	804 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	ZNF862	O60290	1169 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	DKC1	O60832	514 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
TRO-223	ENST00000492142	LGALS2	P05162	132 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	ZNF286B	P0CG31	522 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	CCL5	P13501	91 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	ATP4A	P20648	1035 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	MARK3	P27448	753 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	AFM	P43652	599 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	CPT1A	P50416	773 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	CHMP4BP1	P59074	171 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	MCM6	Q14566	821 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	E2F4	Q16254	413 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.89	□□□□□ -0.67
TRO-223	ENST00000492142	NAALADL2	Q58DX5	795 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	GNAS	Q5JWF2	1037 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	LHX8	Q68G74	356 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	KRBA2	Q6ZNG9	492 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	PLPPR4	Q7Z2D5	763 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	GRAMD1C	Q8IYS0	662 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	CEP57L1	Q8IYX8	460 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	CNNM3	Q8NE01	707 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	RAD54L	Q92698	747 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	STAM	Q92783	540 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	SH2D3A	Q9BRG2	576 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	PYM1	Q9BRP8	204 aa	Known RBP	10.89	□□□□□ -0.67
TRO-223	ENST00000492142	RNF208	Q9H0X6	261 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	UPF3A	Q9H1J1	476 aa	Known RBP	10.89	□□□□□ -0.67
TRO-223	ENST00000492142	SMARCAD1	Q9H4L7	1026 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	PRDM10	Q9NQV6	1147 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	BLOC1S4	Q9NUP1	217 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	USP25	Q9UHP3	1055 aa		10.89	□□□□□ -0.67
TRO-223	ENST00000492142	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.89	□□□□□ -0.67
TRO-223	ENST00000492142	ACTN4	O43707	911 aa	Known RBP	10.88	□□□□□ -0.67
TRO-223	ENST00000492142	MSC	O60682	206 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	ADAMTS4	O75173	837 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	STBD1	O95210	358 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	LYPLA2	O95372	231 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	SLFN14	P0C7P3	912 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	PLA2G4B	P0C869	781 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	MUT	P22033	750 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	YWHAB	P31946	246 aa	Known RBP	10.88	□□□□□ -0.67
TRO-223	ENST00000492142	PRKCE	Q02156	737 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	PLCB4	Q15147	1175 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	CAMK4	Q16566	473 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	XKR9	Q5GH70	373 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	SV2B	Q7L1I2	683 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	C4orf19	Q8IY42	314 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	AFAP1L1	Q8TED9	768 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	PAGE5	Q96GU1	130 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	DEFB118	Q96PH6	123 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	C16orf70	Q9BSU1	422 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	BHMT2	Q9H2M3	363 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	NRBP2	Q9NSY0	501 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	STK17A	Q9UEE5	414 aa		10.88	□□□□□ -0.67
TRO-223	ENST00000492142	EMSY	Q7Z589	1322 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	IGSF9B	Q9UPX0	1349 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	ARHGEF35	A5YM69	484 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142		H3BRB1	525 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	ZEB2	O60315	1214 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	EYA4	O95677	639 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	OAT	P04181	439 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	XRCC6	P12956	609 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
TRO-223	ENST00000492142	HOXD8	P13378	290 aa	Predicted RBP	10.87	□□□□□ -0.67
TRO-223	ENST00000492142	CASP1	P29466	404 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	NPEPPS	P55786	919 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	LRRC41	Q15345	812 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	KCNA10	Q16322	511 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	KLHL40	Q2TBA0	621 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	XKR3	Q5GH77	459 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	PLA2G4F	Q68DD2	849 aa		10.87	□□□□□ -0.67
TRO-223	ENST00000492142	CAVIN1	Q6NZI2	390 aa	Known RBP	10.87	□□□□□ -0.67
TRO-223	ENST00000492142	CXCL17	Q6UXB2	119 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms