RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 HNRNPH3P31942 346 aaKnown RBP11.74□□□□□ -0.53
SNED1-211ENST00000491761 CRKP46108 304 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 PPP1R7Q15435 360 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 KCNK18Q7Z418 384 aa11.74□□□□□ -0.53
SNED1-211ENST00000491761 GSPT2Q8IYD1 628 aaKnown RBP11.74□□□□□ -0.53
SNED1-211ENST00000491761 A0A1B0GUL6 1792 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 NPR1P16066 1061 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 PDE6BP35913 854 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 B4GALNT4Q76KP1 1039 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 DPH6Q7L8W6 267 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 LMBR1Q8WVP7 490 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 IKBKGQ9Y6K9 419 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 CAPN6Q9Y6Q1 641 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 COL22A1Q8NFW1 1626 aaPredicted RBP11.73□□□□□ -0.53
SNED1-211ENST00000491761 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 SLC26A4O43511 780 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 GCNT3O95395 438 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 PRLRP16471 622 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 VPS41P49754 854 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 ARHGAP4P98171 946 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 HHIPL2Q6UWX4 724 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 MMGT1Q8N4V1 131 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 FAM133AQ8N9E0 248 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 RDH13Q8NBN7 331 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 MXD3Q9BW11 206 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 DDX4Q9NQI0 724 aaKnown RBP11.73□□□□□ -0.53
SNED1-211ENST00000491761 CCDC88AQ3V6T2 1871 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 MEIS1O00470 390 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 NCK2O43639 380 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 STAT3P40763 770 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 EPHB4P54760 987 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 PPFIA1Q13136 1202 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 PAK2Q13177 524 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 RPS6KA1Q15418 735 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 UAP1Q16222 522 aaPredicted RBP11.73□□□□□ -0.53
SNED1-211ENST00000491761 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 TBC1D31Q96DN5 1066 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 METTL14Q9HCE5 456 aaKnown RBP11.73□□□□□ -0.53
SNED1-211ENST00000491761 HPCAL4Q9UM19 191 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
SNED1-211ENST00000491761 NPHP3-ACAD11A0A0J9YXS1 232 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 SHMT1P34896 483 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 PCK1P35558 622 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 CACNB3P54284 484 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 SLC7A5Q01650 507 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 ABCB5Q2M3G0 1257 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 POTEGQ6S5H5 508 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 LRRC55Q6ZSA7 311 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 DPH5Q9H2P9 285 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 DBNDD1Q9H9R9 158 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 STIM2Q9P246 746 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 ADAMTS1Q9UHI8 967 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 BZW2Q9Y6E2 419 aaKnown RBP11.72□□□□□ -0.53
SNED1-211ENST00000491761 FAM196BA6NMK8 535 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 FLOT1O75955 427 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 AFPP02771 609 aaKnown RBP11.72□□□□□ -0.53
SNED1-211ENST00000491761 ABCB4P21439 1286 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 CYP4A11Q02928 519 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 GABPAQ06546 454 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 EHHADHQ08426 723 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 RUBCNQ92622 972 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 SYN2Q92777 582 aaPredicted RBP11.72□□□□□ -0.53
SNED1-211ENST00000491761 LRRC1Q9BTT6 524 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 NSRP1Q9H0G5 558 aaKnown RBP11.72□□□□□ -0.53
SNED1-211ENST00000491761 EPHB6O15197 1021 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 FTCDO95954 541 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 ADCY1Q08828 1119 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 ANKRD42Q8N9B4 389 aa11.72□□□□□ -0.53
SNED1-211ENST00000491761 A0A1B0GUA9 196 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 RASSF10A6NK89 507 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 CHMP2AO43633 222 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 PALMO75781 387 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 CLTAP09496 248 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 GGCXP38435 758 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 IFNAR2P48551 515 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 MUM1L1Q5H9M0 696 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 HAS1Q92839 578 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 RSRC1Q96IZ7 334 aaKnown RBP11.71□□□□□ -0.53
SNED1-211ENST00000491761 PLVAPQ9BX97 442 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 GOLGA8KD6RF30 607 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 IFT88Q13099 833 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 CALCOCO2Q13137 446 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 GLE1Q53GS7 698 aaKnown RBP11.71□□□□□ -0.53
SNED1-211ENST00000491761 SYDE2Q5VT97 1194 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 EMBQ6PCB8 327 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 GLIS3Q8NEA6 775 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
SNED1-211ENST00000491761 PDE2AO00408 941 aaPredicted RBP11.71□□□□□ -0.54
SNED1-211ENST00000491761 GDF11O95390 407 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 SNAP25P60880 206 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms