RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 PLPPR4Q7Z2D5 763 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 CCDC155Q8N6L0 562 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 KRI1Q8N9T8 703 aaKnown RBP9.3□□□□□ -0.92
RNF38-209ENST00000491349 KLHDC9Q8NEP7 349 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 GBP4Q96PP9 640 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 MTMR9Q96QG7 549 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 UIMC1Q96RL1 719 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 JPH2Q9BR39 696 aaPredicted RBP9.3□□□□□ -0.92
RNF38-209ENST00000491349 PYM1Q9BRP8 204 aaKnown RBP9.3□□□□□ -0.92
RNF38-209ENST00000491349 NT5C3AQ9H0P0 336 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 UNC45AQ9H3U1 944 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 TUT1Q9H6E5 874 aaKnown RBP9.3□□□□□ -0.92
RNF38-209ENST00000491349 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 TUFT1Q9NNX1 390 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 FAM13BQ9NYF5 915 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 GABBR1Q9UBS5 961 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 PRKAG2Q9UGJ0 569 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 PHF24Q9UPV7 400 aa9.3□□□□□ -0.92
RNF38-209ENST00000491349 A0A1W2PQ45 241 aaPredicted RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 A0A1W2PQY0 241 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 RRN3P2A6NIE6 340 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 DCDC2CA8MYV0 355 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 DHX15O43143 795 aaKnown RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 ADCY6O43306 1168 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 HBP1O60381 514 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 ATG7O95352 703 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 ZNF286BP0CG31 522 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 QARSP47897 775 aaKnown RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 NASPP49321 788 aaPredicted RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 PSEN2P49810 448 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 SOX10P56693 466 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 PURAQ00577 322 aaKnown RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 DNM1Q05193 864 aaKnown RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 NBR1Q14596 966 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 SLC39A14Q15043 492 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 NFRKBQ6P4R8 1299 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 CXCL17Q6UXB2 119 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 TPH2Q8IWU9 490 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 RETREG2Q8NC44 543 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 AFAP1L1Q8TED9 768 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 HAS1Q92839 578 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 PAWRQ96IZ0 340 aaKnown RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 USP28Q96RU2 1077 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 PPME1Q9Y570 386 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 CLIC4Q9Y696 253 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 MORC2Q9Y6X9 1032 aaPredicted RBP9.29□□□□□ -0.92
RNF38-209ENST00000491349 NRCAMQ92823 1304 aa9.29□□□□□ -0.92
RNF38-209ENST00000491349 COL1A2P08123 1366 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 GSTTP1A0A1W2PQM5 241 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 C17orf102A2RUQ5 167 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 CUTAO60888 179 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 LGR5O75473 907 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 F2P00734 622 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 HOXD8P13378 290 aaPredicted RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 EN2P19622 333 aaPredicted RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 MARK3P27448 753 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 TMOD1P28289 359 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 MARCKSP29966 332 aaPredicted RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 DNM2P50570 870 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 ITGA7Q13683 1181 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 PKP1Q13835 747 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 ZRSR1Q15695 479 aaKnown RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 XKR3Q5GH77 459 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 ZNF484Q5JVG2 852 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 FAM173BQ6P4H8 233 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 ABHD15Q6UXT9 468 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 RSPH3Q86UC2 560 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 NACC1Q96RE7 527 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 EIF2AK1Q9BQI3 630 aaKnown RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 POLR3CQ9BUI4 534 aaPredicted RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 TMEM60Q9H2L4 133 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 SRPRBQ9Y5M8 271 aaKnown RBP9.28□□□□□ -0.92
RNF38-209ENST00000491349 WDR81Q562E7 1941 aa9.28□□□□□ -0.92
RNF38-209ENST00000491349 MYADML2A6NDP7 307 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 DDX11L8A8MPP1 907 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 M0QZ92 97 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 ARVCFO00192 962 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 MAGEB2O15479 319 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 CCNE2O96020 404 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 OATP04181 439 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 XRCC6P12956 609 aaKnown RBP eCLIP9.27□□□□□ -0.93
RNF38-209ENST00000491349 RPA1P27694 616 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 PPFIA1Q13136 1202 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 SLC39A5Q6ZMH5 540 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 CABP7Q86V35 215 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 C4orf19Q8IY42 314 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 IGSF22Q8N9C0 903 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 LINC00301Q8NCQ3 95 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 BANK1Q8NDB2 785 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 ATP8B4Q8TF62 1192 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 DYDC2Q96IM9 177 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 LXNQ9BS40 222 aa9.27□□□□□ -0.93
RNF38-209ENST00000491349 LRRC27Q9C0I9 530 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms