RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ERAP1Q9NZ08 941 aa20.83■□□□□ 0.93
MCF2L-230ENST00000491028 WRAP73Q9P2S5 460 aaPredicted RBP20.83■□□□□ 0.93
MCF2L-230ENST00000491028 ZNF862O60290 1169 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 ZNF202O95125 648 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 XRCC6P12956 609 aaKnown RBP eCLIP20.82■□□□□ 0.92
MCF2L-230ENST00000491028 BEX3Q00994 111 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 PRKCEQ02156 737 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 SNW1Q13573 536 aaKnown RBP20.82■□□□□ 0.92
MCF2L-230ENST00000491028 XKR3Q5GH77 459 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 GNASQ5JWF2 1037 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 PCSK9Q8NBP7 692 aaKnown RBP20.82■□□□□ 0.92
MCF2L-230ENST00000491028 GPT2Q8TD30 523 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 TIGD1Q96MW7 591 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 C16orf70Q9BSU1 422 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 PANK2Q9BZ23 570 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 RNF208Q9H0X6 261 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 DNM3Q9UQ16 869 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 ARID2Q68CP9 1835 aa20.82■□□□□ 0.92
MCF2L-230ENST00000491028 MYADML2A6NDP7 307 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 KINO60870 393 aaKnown RBP20.81■□□□□ 0.92
MCF2L-230ENST00000491028 NR1I2O75469 434 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 F2P00734 622 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 OATP04181 439 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 NAALADL2Q58DX5 795 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 TRIM50Q86XT4 487 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 CKAP2LQ8IYA6 745 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 CEP57L1Q8IYX8 460 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 LARP4BQ92615 738 aaKnown RBP20.81■□□□□ 0.92
MCF2L-230ENST00000491028 CCDC34Q96HJ3 373 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 PLIN2Q99541 437 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 KATNAL1Q9BW62 490 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 ANKEF1Q9NU02 776 aa20.81■□□□□ 0.92
MCF2L-230ENST00000491028 DBR1Q9UK59 544 aaKnown RBP20.81■□□□□ 0.92
MCF2L-230ENST00000491028 H3BRB1 525 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 ACTN4O43707 911 aaKnown RBP20.8■□□□□ 0.92
MCF2L-230ENST00000491028 EYA4O95677 639 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 MYL3P08590 195 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 SLFN14P0C7P3 912 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 ZNF286BP0CG31 522 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 ATP4AP20648 1035 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 YWHABP31946 246 aaKnown RBP20.8■□□□□ 0.92
MCF2L-230ENST00000491028 IRX5P78411 483 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-230ENST00000491028 PURAQ00577 322 aaKnown RBP20.8■□□□□ 0.92
MCF2L-230ENST00000491028 LRRC41Q15345 812 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 SKOR2Q2VWA4 1001 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-230ENST00000491028 CCSAPQ6IQ19 270 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-230ENST00000491028 OTUD6AQ7L8S5 288 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 KCNK18Q7Z418 384 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 ARRDC4Q8NCT1 418 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 ATP8B4Q8TF62 1192 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 RAD54LQ92698 747 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 MCOLN1Q9GZU1 580 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 TUT1Q9H6E5 874 aaKnown RBP20.8■□□□□ 0.92
MCF2L-230ENST00000491028 NRBP2Q9NSY0 501 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 BLOC1S4Q9NUP1 217 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 DACT1Q9NYF0 836 aa20.8■□□□□ 0.92
MCF2L-230ENST00000491028 MOXD2PA6NHM9 499 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 E9PMD0 336 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 STBD1O95210 358 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 PSMC6P62333 389 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 LONRF3Q496Y0 759 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 KANK3Q6NY19 840 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 KRBA2Q6ZNG9 492 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 CNNM3Q8NE01 707 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 LRRC15Q8TF66 581 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 BBXQ8WY36 941 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-230ENST00000491028 DEFB118Q96PH6 123 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 TSEN34Q9BSV6 310 aaKnown RBP20.79■□□□□ 0.92
MCF2L-230ENST00000491028 MTG1Q9BT17 334 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-230ENST00000491028 TNMDQ9H2S6 317 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 SERTAD1Q9UHV2 236 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 PPME1Q9Y570 386 aa20.79■□□□□ 0.92
MCF2L-230ENST00000491028 HBP1O60381 514 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 CABYRO75952 493 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 GJB1P08034 283 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 CAPN2P17655 700 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 PLCB4Q15147 1175 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 KCNA10Q16322 511 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 KLHL40Q2TBA0 621 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 ANO5Q75V66 913 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 PIGOQ8TEQ8 1089 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 CCDC43Q96MW1 224 aaKnown RBP20.78■□□□□ 0.92
MCF2L-230ENST00000491028 NIFKQ9BYG3 293 aaKnown RBP20.78■□□□□ 0.92
MCF2L-230ENST00000491028 SEPT9Q9UHD8 586 aaPredicted RBP20.78■□□□□ 0.92
MCF2L-230ENST00000491028 OGDHLQ9ULD0 1010 aa20.78■□□□□ 0.92
MCF2L-230ENST00000491028 SCN10AQ9Y5Y9 1956 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 HAS3O00219 553 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 MYCP01106 439 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-230ENST00000491028 ASGR1P07306 291 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 PLA2G4BP0C869 781 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 MARK3P27448 753 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 RARRES1P49788 294 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 SV2BQ7L1I2 683 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 ELOA2Q8IYF1 753 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-230ENST00000491028 SYT2Q8N9I0 419 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-230ENST00000491028 KAT2BQ92831 832 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 LRRC27Q9C0I9 530 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 BHMT2Q9H2M3 363 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 KBTBD4Q9NVX7 518 aa20.77■□□□□ 0.92
MCF2L-230ENST00000491028 COL1A2P08123 1366 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms