RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 COL11A2P13942 1736 aaPredicted RBP21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 UTRNP46939 3433 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 GNAQP50148 359 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 LRRC41Q15345 812 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 PPP1R7Q15435 360 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 ERMARDQ5T6L9 678 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 FMNL3Q8IVF7 1028 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 CCDC197Q8NCU1 140 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 GLIS3Q8NEA6 775 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 TBC1D16Q8TBP0 767 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 TBC1D22AQ8WUA7 517 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 CUL5Q93034 780 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 XPO6Q96QU8 1125 aaKnown RBP21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 TRIM6Q9C030 488 aaPredicted RBP21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 GOLPH3Q9H4A6 298 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 RIC8AQ9NPQ8 531 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 BAIAP2L1Q9UHR4 511 aa21.12■□□□□ 0.97
SNAPC3-206ENST00000490969 F8VZ95 297 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 NAA25Q14CX7 972 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 NONOQ15233 471 aaKnown RBP eCLIP21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 ACCSLQ4AC99 568 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 KRT25Q7Z3Z0 450 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 FAM133AQ8N9E0 248 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 MDM1Q8TC05 714 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 LARP4BQ92615 738 aaKnown RBP21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 TBC1D31Q96DN5 1066 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 STK17AQ9UEE5 414 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 NOC2LQ9Y3T9 749 aaKnown RBP21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 CCDC88AQ3V6T2 1871 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 LAMB1P07942 1786 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 KIRREL3Q8IZU9 778 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.11■□□□□ 0.972e-8■■□□□ 12.9
SNAPC3-206ENST00000490969 FAM129AQ9BZQ8 928 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 LRRC4CQ9HCJ2 640 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 AIPL1Q9NZN9 384 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 GGA1Q9UJY5 639 aa21.11■□□□□ 0.97
SNAPC3-206ENST00000490969 PPP1R12AO14974 1030 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 SLC8A3P57103 927 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 DHX9Q08211 1270 aaKnown RBP21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 DIXDC1Q155Q3 683 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 KCTD19Q17RG1 926 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 DGKHQ86XP1 1220 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 CENPTQ96BT3 561 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 TLCD1Q96CP7 247 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 RSRC1Q96IZ7 334 aaKnown RBP21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 IL17RBQ9NRM6 502 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 AMACRQ9UHK6 382 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 CCDC188H7C350 402 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 KRIT1O00522 736 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 PPEF1O14829 653 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 CTNND1O60716 968 aaKnown RBP21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 ASIC2Q16515 512 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 PTPROQ16827 1216 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 LRCH2Q5VUJ6 765 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 NEK8Q86SG6 692 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 HOOK2Q96ED9 719 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 PNMA5Q96PV4 448 aa21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 CRNKL1Q9BZJ0 848 aaKnown RBP21.1■□□□□ 0.97
SNAPC3-206ENST00000490969 RIMBP2O15034 1052 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 FKBP3Q00688 224 aaKnown RBP21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 TFAP4Q01664 338 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 FOXR2Q6PJQ5 311 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 METTL13Q8N6R0 699 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 LRRC57Q8N9N7 239 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 CD209Q9NNX6 404 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 ARPP21Q9UBL0 812 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 C6orf229H3BNL8 230 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 TRAF5O00463 557 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 BUB1BO60566 1050 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 TXKP42681 527 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 ZCWPW2Q504Y3 356 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 ANKS4BQ8N8V4 417 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 ZMYND12Q9H0C1 365 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 SLC12A4Q9UP95 1085 aa21.09■□□□□ 0.97
SNAPC3-206ENST00000490969 GSTA1P08263 222 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 ZBTB48P10074 688 aaPredicted RBP21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 ITGA4P13612 1032 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 MAB21L3Q8N8X9 362 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 CCDC63Q8NA47 563 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 CDK5RAP3Q96JB5 506 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 ZNF317Q96PQ6 595 aaPredicted RBP21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 SLITRK6Q9H5Y7 841 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 ATP8A2Q9NTI2 1148 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 PNMA2Q9UL42 364 aa21.08■□□□□ 0.97
SNAPC3-206ENST00000490969 CHRNA5P30532 468 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 PSMD2Q13200 908 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 IFI16Q16666 785 aaKnown RBP21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 SLC4A8Q2Y0W8 1093 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 CRELD2Q6UXH1 353 aaPredicted RBP21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 MYOCDQ8IZQ8 938 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 SEC14L1Q92503 715 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 STAMBPL1Q96FJ0 436 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 EBF2Q9HAK2 575 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 MTMR7Q9Y216 660 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 LTBP1Q14766 1721 aa21.08■□□□□ 0.96
SNAPC3-206ENST00000490969 TTI1O43156 1089 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 NAPAP54920 295 aa21.07■□□□□ 0.96
SNAPC3-206ENST00000490969 EIF3BP55884 814 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms