RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TLE2Q04725 743 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 PPFIA1Q13136 1202 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 STK38Q15208 465 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 IL17AQ16552 155 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 TRIM60Q495X7 471 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 KRT79Q5XKE5 535 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 LXNQ9BS40 222 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 TRPC6Q9Y210 931 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 MBLAC1A4D2B0 266 aaPredicted RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 VWA3AA6NCI4 1184 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 SPTLC2O15270 562 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 STBD1O95210 358 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 INSRRP14616 1297 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 UGCGQ16739 394 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 FAM47CQ5HY64 1035 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 FOXD4L5Q5VV16 416 aaPredicted RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 TAF2Q6P1X5 1199 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 OTUD6AQ7L8S5 288 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 CKAP2LQ8IYA6 745 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 EXOC8Q8IYI6 725 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 KRI1Q8N9T8 703 aaKnown RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 ZNF579Q8NAF0 562 aaKnown RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 FOXD4L4Q8WXT5 416 aaPredicted RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 FTOQ9C0B1 505 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 SCAND2PQ9GZW5 306 aaPredicted RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 FBXO2Q9UK22 296 aaPredicted RBP17.74■□□□□ 0.43
TRA2A-208ENST00000490942 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
TRA2A-208ENST00000490942 MYH15Q9Y2K3 1946 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 EVI5O60447 810 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 PQBP1O60828 265 aaKnown RBP17.73■□□□□ 0.43
TRA2A-208ENST00000490942 CAND2O75155 1236 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 CLTBP09497 229 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 SPATA31C1P0DKV0 1188 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 MARK3P27448 753 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 RBL2Q08999 1139 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 PTK7Q13308 1070 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 GRIK4Q16099 956 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 PTGISQ16647 500 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 HYIQ5T013 277 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 RPAINQ86UA6 219 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 CATSPER3Q86XQ3 398 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 BANK1Q8NDB2 785 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 LMBR1Q8WVP7 490 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 DYDC2Q96IM9 177 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 ANKEF1Q9NU02 776 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 RGL1Q9NZL6 768 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 ATP11BQ9Y2G3 1177 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 NR2E3Q9Y5X4 410 aa17.73■□□□□ 0.43
TRA2A-208ENST00000490942 KDM3AQ9Y4C1 1321 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 KIAA0355O15063 1070 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 MAGEB2O15479 319 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 B4GALT4O60513 344 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 YWHABP31946 246 aaKnown RBP17.72■□□□□ 0.43
TRA2A-208ENST00000490942 CEBPZQ03701 1054 aaKnown RBP17.72■□□□□ 0.43
TRA2A-208ENST00000490942 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 TARBP2Q15633 366 aaKnown RBP17.72■□□□□ 0.43
TRA2A-208ENST00000490942 GDF6Q6KF10 455 aaPredicted RBP17.72■□□□□ 0.43
TRA2A-208ENST00000490942 SERINC5Q86VE9 423 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 TPH2Q8IWU9 490 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 ZNF710Q8N1W2 664 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 CAGE1Q8TC20 777 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 NACC1Q96RE7 527 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 CCSER1Q9C0I3 900 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 NT5C3AQ9H0P0 336 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 SETD4Q9NVD3 440 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
TRA2A-208ENST00000490942 TBX21Q9UL17 535 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 NOD1Q9Y239 953 aa17.72■□□□□ 0.43
TRA2A-208ENST00000490942 MYH9P35579 1960 aaKnown RBP17.71■□□□□ 0.43
TRA2A-208ENST00000490942 ZBTB42B2RXF5 422 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 CCT6AP40227 531 aaKnown RBP17.71■□□□□ 0.43
TRA2A-208ENST00000490942 UBA7P41226 1012 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 CHMP4BP1P59074 171 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 CYP4A11Q02928 519 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 CTTNQ14247 550 aaKnown RBP17.71■□□□□ 0.43
TRA2A-208ENST00000490942 MARCH8Q5T0T0 291 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 ANO5Q75V66 913 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 CCDC155Q8N6L0 562 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 SNX29Q8TEQ0 813 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 CTAGE1Q96RT6 745 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 JPH2Q9BR39 696 aaPredicted RBP17.71■□□□□ 0.43
TRA2A-208ENST00000490942 TRMT13Q9NUP7 481 aaKnown RBP17.71■□□□□ 0.43
TRA2A-208ENST00000490942 WRAP73Q9P2S5 460 aaPredicted RBP17.71■□□□□ 0.43
TRA2A-208ENST00000490942 TUBE1Q9UJT0 475 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 DBR1Q9UK59 544 aaKnown RBP17.71■□□□□ 0.43
TRA2A-208ENST00000490942 PCDHA2Q9Y5H9 948 aa17.71■□□□□ 0.43
TRA2A-208ENST00000490942 CUTAO60888 179 aa17.7■□□□□ 0.42
TRA2A-208ENST00000490942 MED24O75448 989 aa17.7■□□□□ 0.42
TRA2A-208ENST00000490942 CAPN15O75808 1086 aa17.7■□□□□ 0.42
TRA2A-208ENST00000490942 MARCKSP29966 332 aaPredicted RBP17.7■□□□□ 0.42
TRA2A-208ENST00000490942 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
TRA2A-208ENST00000490942 BFSP2Q13515 415 aa17.7■□□□□ 0.42
TRA2A-208ENST00000490942 DPF3Q92784 378 aa17.7■□□□□ 0.42
TRA2A-208ENST00000490942 MMTAG2Q9BU76 263 aaKnown RBP17.7■□□□□ 0.42
TRA2A-208ENST00000490942 TRPV6Q9H1D0 765 aa17.7■□□□□ 0.42
TRA2A-208ENST00000490942 PDLIM7Q9NR12 457 aa17.7■□□□□ 0.42
TRA2A-208ENST00000490942 CYP26B1Q9NR63 512 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms