RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 STXBP4Q6ZWJ1 553 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 MIER3Q7Z3K6 550 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 TMC6Q7Z403 805 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 GPBP1Q86WP2 473 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 CATSPER3Q86XQ3 398 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 GUF1Q8N442 669 aaKnown RBP11.39□□□□□ -0.59
HDAC3-210ENST00000490808 SYT2Q8N9I0 419 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-210ENST00000490808 RDM1Q8NG50 284 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 GPRASP2Q96D09 838 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 MAML3Q96JK9 1138 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 ZNF333Q96JL9 665 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 IWS1Q96ST2 819 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 EIF2AK1Q9BQI3 630 aaKnown RBP11.39□□□□□ -0.59
HDAC3-210ENST00000490808 TINF2Q9BSI4 451 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 PXMP2Q9NR77 195 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 PANK4Q9NVE7 773 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 GABRQQ9UN88 632 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 UBIAD1Q9Y5Z9 338 aa11.39□□□□□ -0.59
HDAC3-210ENST00000490808 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
HDAC3-210ENST00000490808 MYMKA6NI61 221 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 CCP110O43303 1012 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 P4HBP07237 508 aaKnown RBP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 MYCLP12524 364 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 PRKCSHP14314 528 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 GAP43P17677 238 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 JAK3P52333 1124 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 STX17P56962 302 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 KRT76Q01546 638 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 LRRC63Q05C16 580 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 TRIM14Q14142 442 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 MAP3K21Q5TCX8 1036 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 DYMQ7RTS9 669 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 CCDC112Q8NEF3 446 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 MORC4Q8TE76 937 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 P2RX5Q93086 422 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 CCDC43Q96MW1 224 aaKnown RBP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 TAAR1Q96RJ0 339 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 PDCD2LQ9BRP1 358 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 ABHD16BQ9H3Z7 469 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 HMX1Q9NP08 348 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 VAV3Q9UKW4 847 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.38□□□□□ -0.59
HDAC3-210ENST00000490808 COL4A3BPQ9Y5P4 624 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 LCTP09848 1927 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 KIAA1217Q5T5P2 1943 aa11.38□□□□□ -0.59
HDAC3-210ENST00000490808 POTEB3A0JP26 581 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 LRRC10BA6NIK2 292 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 E9PMD0 336 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 PEX10O60683 326 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 COBLO75128 1261 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 MED24O75448 989 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 MYCP01106 439 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-210ENST00000490808 NR3C2P08235 984 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
HDAC3-210ENST00000490808 EIF2AK2P19525 551 aaKnown RBP11.37□□□□□ -0.59
HDAC3-210ENST00000490808 PTGS1P23219 599 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 CAP1Q01518 475 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 BAATQ14032 418 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-210ENST00000490808 HERC4Q5GLZ8 1057 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-210ENST00000490808 FAM26FQ5R3K3 315 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 CDKAL1Q5VV42 579 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 POTEBQ6S5H4 581 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 PPP4R3CPQ6ZMV5 832 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 FILIP1Q7Z7B0 1213 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 PPFIBP1Q86W92 1011 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 LRRC8AQ8IWT6 810 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 TPH2Q8IWU9 490 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 MYOCDQ8IZQ8 938 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 CSGALNACT2Q8N6G5 542 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 TRIB2Q92519 343 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 TIPINQ9BVW5 301 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 ZSWIM4Q9H7M6 989 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 KCNH7Q9NS40 1196 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 SEL1LQ9UBV2 794 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 LIMA1Q9UHB6 759 aaKnown RBP11.37□□□□□ -0.59
HDAC3-210ENST00000490808 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 SAMM50Q9Y512 469 aa11.37□□□□□ -0.59
HDAC3-210ENST00000490808 A0A1B0GTH6 734 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 KCNJ18B7U540 433 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 N4BP3O15049 544 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 GNA14O95837 355 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 INHAP05111 366 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SPATA31C1P0DKV0 1188 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 ARP10275 920 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 ATP1A3P13637 1013 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 CYP11B2P19099 503 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SLC12A3P55017 1021 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 COASYQ13057 564 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 KCNJ12Q14500 433 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 STXBP2Q15833 593 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 TCP11X2Q5H9J9 407 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SPECC1LQ69YQ0 1117 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 KCNV1Q6PIU1 500 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 VSTM4Q8IW00 320 aa11.36□□□□□ -0.59
HDAC3-210ENST00000490808 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-210ENST00000490808 PIAS4Q8N2W9 510 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-210ENST00000490808 CYP2W1Q8TAV3 490 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms