RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 GPM6BQ13491 265 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 LEXMQ3ZCV2 418 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 NAALADL2Q58DX5 795 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 KRT40Q6A162 431 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 BICD2Q8TD16 824 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 PPP2R3CQ969Q6 453 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 ZNF274Q96GC6 653 aaPredicted RBP11.78□□□□□ -0.52
TTC28-207ENST00000490475 C17orf80Q9BSJ5 609 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 PLVAPQ9BX97 442 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 UBE2ZQ9H832 354 aaPredicted RBP11.78□□□□□ -0.52
TTC28-207ENST00000490475 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
TTC28-207ENST00000490475 SMIM35A0A1B0GVV1 85 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 POTEB3A0JP26 581 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 STXBP3O00186 592 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 HBP1O60381 514 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 ATG7O95352 703 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 INSRRP14616 1297 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 ACTR2P61160 394 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 LPIN1Q14693 890 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 NTRK3Q16288 839 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 PFKFB3Q16875 520 aaPredicted RBP11.77□□□□□ -0.53
TTC28-207ENST00000490475 FBXO47Q5MNV8 452 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 POTEBQ6S5H4 581 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 BANK1Q8NDB2 785 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 DNAJB3Q8WWF6 145 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 PHKBQ93100 1093 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 C22orf23Q9BZE7 217 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 NSUN3Q9H649 340 aaKnown RBP11.77□□□□□ -0.53
TTC28-207ENST00000490475 TBC1D22BQ9NU19 505 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 TRPV2Q9Y5S1 764 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 CDY2AQ9Y6F7 541 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 MYH9P35579 1960 aaKnown RBP11.77□□□□□ -0.53
TTC28-207ENST00000490475 ADGRA3Q8IWK6 1321 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 KDM3AQ9Y4C1 1321 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 COL1A2P08123 1366 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 REV3LO60673 3130 aa11.77□□□□□ -0.53
TTC28-207ENST00000490475 ENPP3O14638 875 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 BACH1O14867 736 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 DTNBO60941 627 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 CYP3A4P08684 503 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 SCG2P13521 617 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 COL9A1P20849 921 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 BMPR1AP36894 532 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
TTC28-207ENST00000490475 AK2P54819 239 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 IGBP1P78318 339 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 MARCH8Q5T0T0 291 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 MIS18BP1Q6P0N0 1132 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 SMAP1Q8IYB5 467 aaPredicted RBP11.76□□□□□ -0.53
TTC28-207ENST00000490475 CCDC148Q8NFR7 591 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
TTC28-207ENST00000490475 P2RX5Q93086 422 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 KIF2CQ99661 725 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 ZMYND12Q9H0C1 365 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 AGO4Q9HCK5 861 aaKnown RBP11.76□□□□□ -0.53
TTC28-207ENST00000490475 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 CEP131Q9UPN4 1083 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 ARIH1Q9Y4X5 557 aaPredicted RBP11.76□□□□□ -0.53
TTC28-207ENST00000490475 IGSF9BQ9UPX0 1349 aa11.76□□□□□ -0.53
TTC28-207ENST00000490475 IGKV6D-21A0A0A0MT36 114 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 FSD2A1L4K1 749 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 KCNA5P22460 613 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 CTNNB1P35222 781 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 KRT76Q01546 638 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 PAK2Q13177 524 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 BTG3Q14201 252 aaPredicted RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 PLCB4Q15147 1175 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 PKN1Q16512 942 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 ZNF484Q5JVG2 852 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 TYW1BQ6NUM6 668 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 ZNF746Q6NUN9 644 aaPredicted RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 PLA2G4DQ86XP0 818 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 CMTR2Q8IYT2 770 aaKnown RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 FAM177A1Q8N128 213 aaPredicted RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 ATP8B4Q8TF62 1192 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 ZNF689Q96CS4 500 aaPredicted RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 PABPC5Q96DU9 382 aaKnown RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 PCYT2Q99447 389 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 SLC26A6Q9BXS9 759 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 CELF4Q9BZC1 486 aaKnown RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 FAM49AQ9H0Q0 323 aaPredicted RBP11.75□□□□□ -0.53
TTC28-207ENST00000490475 XIRP2A4UGR9 3374 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 NID2Q14112 1375 aa11.75□□□□□ -0.53
TTC28-207ENST00000490475 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
TTC28-207ENST00000490475 GPR182O15218 404 aa11.74□□□□□ -0.53
TTC28-207ENST00000490475 DGKIO75912 1065 aa11.74□□□□□ -0.53
TTC28-207ENST00000490475 ARP10275 920 aa11.74□□□□□ -0.53
TTC28-207ENST00000490475 IFNAR1P17181 557 aa11.74□□□□□ -0.53
TTC28-207ENST00000490475 PDXDC2PQ6P474 469 aa11.74□□□□□ -0.53
TTC28-207ENST00000490475 MTHFD1LQ6UB35 978 aa11.74□□□□□ -0.53
TTC28-207ENST00000490475 ABHD15Q6UXT9 468 aa11.74□□□□□ -0.53
TTC28-207ENST00000490475 CYP2W1Q8TAV3 490 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms