RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 CHRNA1P02708 482 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 PSAPP07602 524 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 MKRN4PQ13434 485 aaPredicted RBP22.36■■□□□ 1.17
SMC4-222ENST00000490207 C8orf34Q49A92 452 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 Q4G0T1 1027 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 SWSAP1Q6NVH7 229 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 APBB2Q92870 758 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 ZBED2Q9BTP6 218 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 SAMM50Q9Y512 469 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 COL1A2P08123 1366 aa22.36■■□□□ 1.17
SMC4-222ENST00000490207 MYO9BQ13459 2157 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 GAS7O60861 476 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 GJB5O95377 273 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 AMHP03971 560 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 GHRP10912 638 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 MRPS6P82932 125 aaKnown RBP22.35■■□□□ 1.17
SMC4-222ENST00000490207 LRCH2Q5VUJ6 765 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 MOXD1Q6UVY6 613 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.35■■□□□ 1.17
SMC4-222ENST00000490207 MYOCDQ8IZQ8 938 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 SLC5A5Q92911 643 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 TEKT3Q9BXF9 490 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 IFIH1Q9BYX4 1025 aaKnown RBP22.35■■□□□ 1.17
SMC4-222ENST00000490207 PCDHA2Q9Y5H9 948 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 PCDHA10Q9Y5I2 948 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 CDY2AQ9Y6F7 541 aa22.35■■□□□ 1.17
SMC4-222ENST00000490207 IGSF9BQ9UPX0 1349 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 CCDC194A0A1B0GVG4 234 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 WDR64B1ANS9 1081 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 ARHGEF15O94989 841 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 INF2Q27J81 1249 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 MTHFD1LQ6UB35 978 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 CKAP2LQ8IYA6 745 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 RIT2Q99578 217 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 GJB4Q9NTQ9 266 aa22.34■■□□□ 1.17
SMC4-222ENST00000490207 MAFBQ9Y5Q3 323 aaPredicted RBP22.34■■□□□ 1.17
SMC4-222ENST00000490207 EVPLQ92817 2033 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 CYP3A7-CYP3A51PA0A087WV96 503 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 M0QZ92 97 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 CHMP2AO43633 222 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 CYP3A7P24462 503 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 TAP1Q03518 808 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 ZNF484Q5JVG2 852 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 FAM117BQ6P1L5 589 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 NSUN7Q8NE18 718 aaKnown RBP22.33■■□□□ 1.17
SMC4-222ENST00000490207 BBXQ8WY36 941 aaPredicted RBP22.33■■□□□ 1.17
SMC4-222ENST00000490207 GABBR1Q9UBS5 961 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 TRPV2Q9Y5S1 764 aa22.33■■□□□ 1.17
SMC4-222ENST00000490207 SMIM35A0A1B0GVV1 85 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 LCHNA4D1U4 455 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 FDPSP14324 419 aaKnown RBP22.32■■□□□ 1.16
SMC4-222ENST00000490207 ATP4AP20648 1035 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 JAK3P52333 1124 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 ADGRE1Q14246 886 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 LPIN1Q14693 890 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 FBXO47Q5MNV8 452 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 IER5Q5VY09 327 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 GJA10Q969M2 543 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 MBOAT7Q96N66 472 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 RAD9AQ99638 391 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 UNC45AQ9H3U1 944 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 CERS4Q9HA82 394 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 DISC1Q9NRI5 854 aa22.32■■□□□ 1.16
SMC4-222ENST00000490207 DDX25Q9UHL0 483 aaKnown RBP22.32■■□□□ 1.16
SMC4-222ENST00000490207 IGFBP4P22692 258 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 SFNP31947 248 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 TMEM62Q0P6H9 643 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 LETM2Q2VYF4 491 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 TSHZ1Q6ZSZ6 1077 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 NEK8Q86SG6 692 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 OXER1Q8TDS5 423 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 FAM167AQ96KS9 214 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 BRMS1Q9HCU9 246 aa22.31■■□□□ 1.16
SMC4-222ENST00000490207 COL4A6Q14031 1691 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.3■■□□□ 1.16
SMC4-222ENST00000490207 ZBTB42B2RXF5 422 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 SLC37A4O43826 429 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 JAK2O60674 1132 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 PSMD10O75832 226 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 KLRC1P26715 233 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 KRT2P35908 639 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 ST3GAL1Q11201 340 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 PIK3AP1Q6ZUJ8 805 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 TRMT1LQ7Z2T5 733 aaKnown RBP22.3■■□□□ 1.16
SMC4-222ENST00000490207 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.3■■□□□ 1.16
SMC4-222ENST00000490207 ETNPPLQ8TBG4 499 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 ARNTL2Q8WYA1 636 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 CEP131Q9UPN4 1083 aa22.3■■□□□ 1.16
SMC4-222ENST00000490207 NLRC5Q86WI3 1866 aa22.29■■□□□ 1.16
SMC4-222ENST00000490207 PRKCEQ02156 737 aa22.29■■□□□ 1.16
SMC4-222ENST00000490207 MIER3Q7Z3K6 550 aa22.29■■□□□ 1.16
SMC4-222ENST00000490207 SPRED2Q7Z698 418 aa22.29■■□□□ 1.16
SMC4-222ENST00000490207 USP38Q8NB14 1042 aa22.29■■□□□ 1.16
SMC4-222ENST00000490207 RDM1Q8NG50 284 aa22.29■■□□□ 1.16
SMC4-222ENST00000490207 SQORQ9Y6N5 450 aa22.29■■□□□ 1.16
SMC4-222ENST00000490207 EPOPA6NHQ4 379 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 C22orf31O95567 290 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 OATP04181 439 aa22.28■■□□□ 1.16
SMC4-222ENST00000490207 GCFC2P16383 781 aaKnown RBP22.28■■□□□ 1.16
SMC4-222ENST00000490207 FOSBP53539 338 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms