RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 RPAINQ86UA6 219 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 SERINC5Q86VE9 423 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 KCTD17Q8N5Z5 321 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 LMBR1Q8WVP7 490 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 AK8Q96MA6 479 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 ZSWIM4Q9H7M6 989 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 TUFT1Q9NNX1 390 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 RBM19Q9Y4C8 960 aaKnown RBP19.58■□□□□ 0.72
ERCC3-207ENST00000490062 PPME1Q9Y570 386 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 CLIC4Q9Y696 253 aa19.58■□□□□ 0.72
ERCC3-207ENST00000490062 ZBTB42B2RXF5 422 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 RPLP2P05387 115 aaKnown RBP19.57■□□□□ 0.72
ERCC3-207ENST00000490062 XRCC6P12956 609 aaKnown RBP eCLIP19.57■□□□□ 0.72
ERCC3-207ENST00000490062 INSRRP14616 1297 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 MARK3P27448 753 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 PRKCEQ02156 737 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 PTK7Q13308 1070 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 TARBP2Q15633 366 aaKnown RBP19.57■□□□□ 0.72
ERCC3-207ENST00000490062 GRIK4Q16099 956 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 PTGISQ16647 500 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 FAM47CQ5HY64 1035 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 HAUS3Q68CZ6 603 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 LINC00301Q8NCQ3 95 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 ERMNQ8TAM6 284 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 DPF3Q92784 378 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 LXNQ9BS40 222 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 TRPV6Q9H1D0 765 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 NRBP2Q9NSY0 501 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 TRMT13Q9NUP7 481 aaKnown RBP19.57■□□□□ 0.72
ERCC3-207ENST00000490062 ATP6V1DQ9Y5K8 247 aa19.57■□□□□ 0.72
ERCC3-207ENST00000490062 TRIP12Q14669 1992 aaPredicted RBP19.57■□□□□ 0.72
ERCC3-207ENST00000490062 SPATA31C1P0DKV0 1188 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 MARCH8Q5T0T0 291 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 CAGE1Q8TC20 777 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 DYDC2Q96IM9 177 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 CEP89Q96ST8 783 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 FTOQ9C0B1 505 aaKnown RBP eCLIP19.56■□□□□ 0.72
ERCC3-207ENST00000490062 SETD4Q9NVD3 440 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 RGL1Q9NZL6 768 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 WRAP73Q9P2S5 460 aaPredicted RBP19.56■□□□□ 0.72
ERCC3-207ENST00000490062 LRWD1Q9UFC0 647 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 TRPC6Q9Y210 931 aa19.56■□□□□ 0.72
ERCC3-207ENST00000490062 SRPRBQ9Y5M8 271 aaKnown RBP19.56■□□□□ 0.72
ERCC3-207ENST00000490062 PITPNM1O00562 1244 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 CAND2O75155 1236 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 PPP6R2O75170 966 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 LONP1P36776 959 aaKnown RBP19.55■□□□□ 0.72
ERCC3-207ENST00000490062 TRIM71Q2Q1W2 868 aaKnown RBP19.55■□□□□ 0.72
ERCC3-207ENST00000490062 HYIQ5T013 277 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 TAF2Q6P1X5 1199 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 CATSPER3Q86XQ3 398 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 C7orf61Q8IZ16 206 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 BANK1Q8NDB2 785 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 CFAP45Q9UL16 551 aa19.55■□□□□ 0.72
ERCC3-207ENST00000490062 TRIM43BA6NCK2 446 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 TREHO43280 583 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 ANO5Q75V66 913 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 CKAP2LQ8IYA6 745 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 DHX38Q92620 1227 aaKnown RBP19.54■□□□□ 0.72
ERCC3-207ENST00000490062 TRIM43Q96BQ3 446 aaPredicted RBP19.54■□□□□ 0.72
ERCC3-207ENST00000490062 MMTAG2Q9BU76 263 aaKnown RBP19.54■□□□□ 0.72
ERCC3-207ENST00000490062 NOC4LQ9BVI4 516 aaKnown RBP19.54■□□□□ 0.72
ERCC3-207ENST00000490062 ANKEF1Q9NU02 776 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 TMEM39AQ9NV64 488 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 TUBE1Q9UJT0 475 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 FBXO2Q9UK22 296 aaPredicted RBP19.54■□□□□ 0.72
ERCC3-207ENST00000490062 PCDHA2Q9Y5H9 948 aa19.54■□□□□ 0.72
ERCC3-207ENST00000490062 TNRC18O15417 2968 aaPredicted RBP19.54■□□□□ 0.72
ERCC3-207ENST00000490062 LTBP2Q14767 1821 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 VWA3AA6NCI4 1184 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 MAGEB2O15479 319 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 MED24O75448 989 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 ZNF200P98182 395 aaPredicted RBP19.53■□□□□ 0.72
ERCC3-207ENST00000490062 SH3RF1Q7Z6J0 888 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 CCDC155Q8N6L0 562 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 PPP1R13LQ8WUF5 828 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 DAXXQ9UER7 740 aaPredicted RBP19.53■□□□□ 0.72
ERCC3-207ENST00000490062 NOD1Q9Y239 953 aa19.53■□□□□ 0.72
ERCC3-207ENST00000490062 IGKV6-21A0A0C4DH24 114 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 SMIM35A0A1B0GVV1 85 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 C22orf31O95567 290 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 TIMP1P01033 207 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 YWHABP31946 246 aaKnown RBP19.52■□□□□ 0.72
ERCC3-207ENST00000490062 CHMP4BP1P59074 171 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 CYP4A11Q02928 519 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 BFSP2Q13515 415 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 CTTNQ14247 550 aaKnown RBP19.52■□□□□ 0.72
ERCC3-207ENST00000490062 FOXD4L5Q5VV16 416 aaPredicted RBP19.52■□□□□ 0.72
ERCC3-207ENST00000490062 KRT79Q5XKE5 535 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 MTHFD1LQ6UB35 978 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 OTUD6AQ7L8S5 288 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 TPH2Q8IWU9 490 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 LINC01465Q8N7H1 131 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 KCNG4Q8TDN1 519 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 FOXD4L4Q8WXT5 416 aaPredicted RBP19.52■□□□□ 0.72
ERCC3-207ENST00000490062 HIPK3Q9H422 1215 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 PRKAG2Q9UGJ0 569 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 DBR1Q9UK59 544 aaKnown RBP19.52■□□□□ 0.72
ERCC3-207ENST00000490062 RCOR1Q9UKL0 485 aa19.52■□□□□ 0.72
ERCC3-207ENST00000490062 KDM3AQ9Y4C1 1321 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms