RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 SEC63Q9UGP8 760 aaKnown RBP6.63□□□□□ -1.35
CNOT9-207ENST00000489687 R3HCC1Q9Y3T6 440 aaKnown RBP6.63□□□□□ -1.35
CNOT9-207ENST00000489687 ATG2AQ2TAZ0 1938 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 HAS3O00219 553 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 MEIS2O14770 477 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 CTIFO43310 598 aaKnown RBP6.62□□□□□ -1.35
CNOT9-207ENST00000489687 HOXD8P13378 290 aaPredicted RBP6.62□□□□□ -1.35
CNOT9-207ENST00000489687 KIF5BP33176 963 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 THPOP40225 353 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 NASPP49321 788 aaPredicted RBP6.62□□□□□ -1.35
CNOT9-207ENST00000489687 CLK2P49760 499 aaKnown RBP6.62□□□□□ -1.35
CNOT9-207ENST00000489687 EMP3P54852 163 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 TAP1Q03518 808 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 LAMC2Q13753 1193 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 BMP2KLQ5H9B9 411 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 WWC2Q6AWC2 1192 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 APOA5Q6Q788 366 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 SESTD1Q86VW0 696 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 HERC6Q8IVU3 1022 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 RPUSD2Q8IZ73 545 aaKnown RBP6.62□□□□□ -1.35
CNOT9-207ENST00000489687 CCDC155Q8N6L0 562 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 AFAP1L1Q8TED9 768 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 INPP4AQ96PE3 977 aaPredicted RBP6.62□□□□□ -1.35
CNOT9-207ENST00000489687 C16orf70Q9BSU1 422 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 MLXIPQ9HAP2 919 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 UPF2Q9HAU5 1272 aaKnown RBP6.62□□□□□ -1.35
CNOT9-207ENST00000489687 SETD4Q9NVD3 440 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 PCDHA11Q9Y5I1 949 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 SLC12A7Q9Y666 1083 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 LOXHD1Q8IVV2 1947 aa6.62□□□□□ -1.35
CNOT9-207ENST00000489687 WDFY4Q6ZS81 3184 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 KLF18A0A0U1RQI7 1052 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 C17orf102A2RUQ5 167 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 GOLGA8AA7E2F4 631 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 GOLGA8BA8MQT2 603 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 ADAMTS3O15072 1205 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 TREHO43280 583 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 FIBPO43427 364 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 TLL1O43897 1013 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 CDC45O75419 566 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 CSPG5O95196 566 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 PFKMP08237 780 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 ACTN1P12814 892 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 ITGB5P18084 799 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 RFC2P35250 354 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 KCNJ6P48051 423 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 KCNQ1P51787 676 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 ARHGAP4P98171 946 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 PTPN11Q06124 597 aaPredicted RBP6.61□□□□□ -1.35
CNOT9-207ENST00000489687 NECTIN1Q15223 517 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 GNPTABQ3T906 1256 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 PCNX4Q63HM2 1172 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 METTL7BQ6UX53 244 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.61□□□□□ -1.35
CNOT9-207ENST00000489687 RUFY4Q6ZNE9 571 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 SERINC5Q86VE9 423 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 CAGE1Q8TC20 777 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 LMBR1Q8WVP7 490 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 KHSRPQ92945 711 aaKnown RBP eCLIP6.61□□□□□ -1.35
CNOT9-207ENST00000489687 CUL5Q93034 780 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 ATP6V0A1Q93050 837 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 TMEM87BQ96K49 555 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 SLC9A7Q96T83 725 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 GPR20Q99678 358 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 KATNAL1Q9BW62 490 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 SEZ6LQ9BYH1 1024 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 SPTLC3Q9NUV7 552 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 TMEM260Q9NX78 707 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 FAM53CQ9NYF3 392 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 THEGQ9P2T0 379 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 NLRC5Q86WI3 1866 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 MUC6Q6W4X9 2439 aa6.61□□□□□ -1.35
CNOT9-207ENST00000489687 SPATA31C2B4DYI2 1134 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 H3BRB1 525 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 KIF1CO43896 1103 aaKnown RBP6.6□□□□□ -1.35
CNOT9-207ENST00000489687 DTNBO60941 627 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 ATP9AO75110 1047 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 SLFN14P0C7P3 912 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 CD46P15529 392 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 KCNA2P16389 499 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 IBSPP21815 317 aaPredicted RBP6.6□□□□□ -1.35
CNOT9-207ENST00000489687 CDC27P30260 824 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 TCF7P36402 384 aaPredicted RBP6.6□□□□□ -1.35
CNOT9-207ENST00000489687 NAPAP54920 295 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 IGBP1P78318 339 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 SETQ01105 290 aaPredicted RBP6.6□□□□□ -1.35
CNOT9-207ENST00000489687 RBL2Q08999 1139 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 APOBRQ0VD83 1088 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 PTK7Q13308 1070 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 GRB10Q13322 594 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 RTN1Q16799 776 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 KMT5BQ4FZB7 885 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 CNKSR3Q6P9H4 555 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 GAS2L3Q86XJ1 694 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 MYOCDQ8IZQ8 938 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 ZNF687Q8N1G0 1237 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 FANCBQ8NB91 859 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 RDH13Q8NBN7 331 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 CYP2W1Q8TAV3 490 aa6.6□□□□□ -1.35
CNOT9-207ENST00000489687 TRAPPC12Q8WVT3 735 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms