RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 FMNL3Q8IVF7 1028 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 GPC2Q8N158 579 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 ACER1Q8TDN7 264 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 NACC1Q96RE7 527 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 RIT2Q99578 217 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 ODF2LQ9ULJ1 636 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 DAAM1Q9Y4D1 1078 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 NPHP3-ACAD11A0A0J9YXS1 232 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 GTPBP10A4D1E9 387 aaKnown RBP16.45■□□□□ 0.22
COL9A1-208ENST00000489611 EIF3JO75822 258 aaKnown RBP16.45■□□□□ 0.22
COL9A1-208ENST00000489611 ATP1A1P05023 1023 aaKnown RBP16.45■□□□□ 0.22
COL9A1-208ENST00000489611 XRCC5P13010 732 aaKnown RBP16.45■□□□□ 0.22
COL9A1-208ENST00000489611 TCP1P17987 556 aaKnown RBP16.45■□□□□ 0.22
COL9A1-208ENST00000489611 MAGEA1P43355 309 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 PSMC6P62333 389 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 CYP27A1Q02318 531 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 RASA3Q14644 834 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 LONRF2Q1L5Z9 754 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 SFR1Q86XK3 245 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 MCF2L2Q86YR7 1114 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 TRPM4Q8TD43 1214 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 LPAR1Q92633 364 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 FUT8Q9BYC5 575 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 GPRC5DQ9NZD1 345 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 PGAP2Q9UHJ9 254 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 HACL1Q9UJ83 578 aa16.45■□□□□ 0.22
COL9A1-208ENST00000489611 ATP8B3O60423 1300 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 MEIS1O00470 390 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 ZNF263O14978 683 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL9A1-208ENST00000489611 GAS7O60861 476 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 AFPP02771 609 aaKnown RBP16.44■□□□□ 0.22
COL9A1-208ENST00000489611 EPB41P11171 864 aaKnown RBP16.44■□□□□ 0.22
COL9A1-208ENST00000489611 GHRHRQ02643 423 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 HGSNATQ68CP4 663 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 ZNF572Q7Z3I7 529 aaPredicted RBP16.44■□□□□ 0.22
COL9A1-208ENST00000489611 MKNK1Q9BUB5 465 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 ACBD3Q9H3P7 528 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 RNF14Q9UBS8 474 aa16.44■□□□□ 0.22
COL9A1-208ENST00000489611 RCCD1A6NED2 376 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 MAP2K7O14733 419 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 NOL4O94818 638 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 SLITRK3O94933 977 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 ICAM1P05362 532 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 TNFAIP1Q13829 316 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 EPHA7Q15375 998 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 GPR162Q16538 588 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 TDRD12Q587J7 1177 aaKnown RBP16.43■□□□□ 0.22
COL9A1-208ENST00000489611 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 GOLGA5Q8TBA6 731 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 SMCR8Q8TEV9 937 aaPredicted RBP16.43■□□□□ 0.22
COL9A1-208ENST00000489611 NOX5Q96PH1 765 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 LSM14BQ9BX40 385 aaKnown RBP16.43■□□□□ 0.22
COL9A1-208ENST00000489611 FGFBP2Q9BYJ0 223 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 JADE2Q9NQC1 790 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 SNX12Q9UMY4 172 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 FAM13AO94988 1023 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 PLA2G4AP47712 749 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 HSD17B4P51659 736 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
COL9A1-208ENST00000489611 TERF2Q15554 542 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 BEND6Q5SZJ8 279 aaPredicted RBP16.43■□□□□ 0.22
COL9A1-208ENST00000489611 LDHDQ86WU2 507 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 PRPF38AQ8NAV1 312 aaKnown RBP16.43■□□□□ 0.22
COL9A1-208ENST00000489611 TEKT3Q9BXF9 490 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 PARVGQ9HBI0 331 aa16.43■□□□□ 0.22
COL9A1-208ENST00000489611 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 SBF1O95248 1867 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 MACROD2A1Z1Q3 448 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 ENC1O14682 589 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 WDR46O15213 610 aaKnown RBP16.42■□□□□ 0.22
COL9A1-208ENST00000489611 NR3C1P04150 777 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 PLEKP08567 350 aaPredicted RBP16.42■□□□□ 0.22
COL9A1-208ENST00000489611 FDX1P10109 184 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 USP14P54578 494 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 POLR2FP61218 127 aaKnown RBP16.42■□□□□ 0.22
COL9A1-208ENST00000489611 CYP4A11Q02928 519 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 RAD51AP2Q09MP3 1159 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 SLC18A3Q16572 532 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 KIAA1755Q5JYT7 1200 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 CYP2W1Q8TAV3 490 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 ZNF577Q9BSK1 485 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 EPC1Q9H2F5 836 aa16.42■□□□□ 0.22
COL9A1-208ENST00000489611 RBBP6Q7Z6E9 1792 aaKnown RBP16.42■□□□□ 0.22
COL9A1-208ENST00000489611 BTNL10A8MVZ5 291 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 EML1O00423 815 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 SEC31AO94979 1220 aaKnown RBP16.41■□□□□ 0.22
COL9A1-208ENST00000489611 GCNT3O95395 438 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 ZNF131P52739 623 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 HIRAP54198 1017 aaPredicted RBP16.41■□□□□ 0.22
COL9A1-208ENST00000489611 ALCAMQ13740 583 aa16.41■□□□□ 0.22
COL9A1-208ENST00000489611 MYBPC2Q14324 1141 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms