RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 MCTP1Q6DN14 999 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 NCAPH2Q6IBW4 605 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 PSRC1Q6PGN9 363 aaPredicted RBP13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 OTOP2Q7RTS6 562 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 NOSTRINQ8IVI9 506 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 BANK1Q8NDB2 785 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 NAP1L4Q99733 375 aaKnown RBP13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 MAFBQ9Y5Q3 323 aaPredicted RBP13.83□□□□□ -0.2
SMARCD3-213ENST00000489503 ZBTB42B2RXF5 422 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 H3BQV1 296 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 NBNO60934 754 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 GNAT1P11488 350 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 TTC38Q5R3I4 469 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 FAM109BQ6ICB4 259 aaPredicted RBP13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 DNAJB3Q8WWF6 145 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 FAM20AQ96MK3 541 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 FTOQ9C0B1 505 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 KIF3AQ9Y496 699 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 PTPRSQ13332 1948 aa13.82□□□□□ -0.2
SMARCD3-213ENST00000489503 GBF1Q92538 1859 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 MBLAC1A4D2B0 266 aaPredicted RBP13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 ZBBXA8MT70 800 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 HBP1O60381 514 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 OATP04181 439 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 SFNP31947 248 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 SLC26A2P50443 739 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 SPIRE1Q08AE8 756 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 TMEM62Q0P6H9 643 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 PPP2R5CQ13362 524 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 SH2D3AQ9BRG2 576 aa13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 WRAP73Q9P2S5 460 aaPredicted RBP13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
SMARCD3-213ENST00000489503 EVPLQ92817 2033 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 LAMA3Q16787 3333 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 POTEMA6NI47 508 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 RRN3P2A6NIE6 340 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 TBX3O15119 743 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 C22orf31O95567 290 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 FGBP02675 491 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 U2AF2P26368 475 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 RFC2P35250 354 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 TXKP42681 527 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 TOB1P50616 345 aaPredicted RBP13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 CYP4A11Q02928 519 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 LRIT3Q3SXY7 679 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 PLA2G4FQ68DD2 849 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 MTHFD1LQ6UB35 978 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 RDM1Q8NG50 284 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 RGL1Q9NZL6 768 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 NOL7Q9UMY1 257 aaKnown RBP13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 PCDHB6Q9Y5E3 794 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 COL1A2P08123 1366 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
SMARCD3-213ENST00000489503 VPS37CA5D8V6 355 aaPredicted RBP13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 STBD1O95210 358 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 CHRNA1P02708 482 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 KLRC1P26715 233 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 CLCN3P51790 818 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 MGAT3Q09327 533 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 CTTNQ14247 550 aaKnown RBP13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 MTERF2Q49AM1 385 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 ZNF484Q5JVG2 852 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 RASIP1Q5U651 963 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 LARP1BQ659C4 914 aaKnown RBP13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 FERMT3Q86UX7 667 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 SLFN12Q8IYM2 578 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 RPUSD2Q8IZ73 545 aaKnown RBP13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 BBXQ8WY36 941 aaPredicted RBP13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 HERVK_113Q902F9 699 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 DYDC2Q96IM9 177 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 FAM167AQ96KS9 214 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 MTMR9Q96QG7 549 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 TTC12Q9H892 705 aaPredicted RBP13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 CDY2AQ9Y6F7 541 aa13.79□□□□□ -0.2
SMARCD3-213ENST00000489503 CXCL10P02778 98 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 PFKMP08237 780 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 GHRP10912 638 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 MRPS6P82932 125 aaKnown RBP13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 TMCO2Q7Z6W1 182 aaPredicted RBP13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 LRRC71Q8N4P6 559 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 SNX21Q969T3 373 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 LXNQ9BS40 222 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 PCDHA2Q9Y5H9 948 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 MICAL3Q7RTP6 2002 aa13.78□□□□□ -0.2
SMARCD3-213ENST00000489503 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 CAND2O75155 1236 aa13.77□□□□□ -0.21
SMARCD3-213ENST00000489503 PBX2P40425 430 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms