RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TRPV2Q9Y5S1 764 aa18.63■□□□□ 0.57
USP48-210ENST00000489108 MYO15AQ9UKN7 3530 aa18.62■□□□□ 0.57
USP48-210ENST00000489108 RRN3P2A6NIE6 340 aa18.62■□□□□ 0.57
USP48-210ENST00000489108 GALR2O43603 387 aaPredicted RBP18.62■□□□□ 0.57
USP48-210ENST00000489108 SP100P23497 879 aaPredicted RBP18.62■□□□□ 0.57
USP48-210ENST00000489108 UBE3AQ05086 875 aa18.62■□□□□ 0.57
USP48-210ENST00000489108 PAK2Q13177 524 aa18.62■□□□□ 0.57
USP48-210ENST00000489108 FNDC1Q4ZHG4 1894 aaPredicted RBP18.61■□□□□ 0.57
USP48-210ENST00000489108 IGSF9BQ9UPX0 1349 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 M0QZ92 97 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 MEIS2O14770 477 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 FGF18O76093 207 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 TECP42680 631 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 NUBP1P53384 320 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 TMEM266Q2M3C6 531 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 ANKRD54Q6NXT1 300 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 SYCE2Q6PIF2 218 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 CUL5Q93034 780 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 GPRASP2Q96D09 838 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 CDCA3Q99618 268 aaPredicted RBP18.61■□□□□ 0.57
USP48-210ENST00000489108 CELF4Q9BZC1 486 aaKnown RBP18.61■□□□□ 0.57
USP48-210ENST00000489108 PKD2L1Q9P0L9 805 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 PCDHB7Q9Y5E2 793 aa18.61■□□□□ 0.57
USP48-210ENST00000489108 RIF1Q5UIP0 2472 aaKnown RBP18.61■□□□□ 0.57
USP48-210ENST00000489108 TBKBP1A7MCY6 615 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 RPLP2P05387 115 aaKnown RBP18.6■□□□□ 0.57
USP48-210ENST00000489108 SARSP49591 514 aaKnown RBP18.6■□□□□ 0.57
USP48-210ENST00000489108 TROAPQ12815 778 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 NFX1Q12986 1120 aaKnown RBP18.6■□□□□ 0.57
USP48-210ENST00000489108 KCNC3Q14003 757 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 FAM102BQ5T8I3 360 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
USP48-210ENST00000489108 TMEM184AQ6ZMB5 413 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 KREMEN2Q8NCW0 462 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 TRAPPC12Q8WVT3 735 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 PCYT2Q99447 389 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 AAASQ9NRG9 546 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 TMEM260Q9NX78 707 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 HCSTQ9UBK5 93 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 TRPC6Q9Y210 931 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 PCDHA2Q9Y5H9 948 aa18.6■□□□□ 0.57
USP48-210ENST00000489108 PRR23AA6NEV1 266 aa18.59■□□□□ 0.57
USP48-210ENST00000489108 PIK3CDO00329 1044 aa18.59■□□□□ 0.57
USP48-210ENST00000489108 IFIT3O14879 490 aaKnown RBP18.59■□□□□ 0.57
USP48-210ENST00000489108 FSCN2O14926 492 aa18.59■□□□□ 0.57
USP48-210ENST00000489108 ITGB5P18084 799 aa18.59■□□□□ 0.57
USP48-210ENST00000489108 APOBRQ0VD83 1088 aa18.59■□□□□ 0.57
USP48-210ENST00000489108 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
USP48-210ENST00000489108 THNSL1Q8IYQ7 743 aa18.59■□□□□ 0.57
USP48-210ENST00000489108 CDHR1Q96JP9 859 aa18.59■□□□□ 0.57
USP48-210ENST00000489108 TYW1Q9NV66 732 aaKnown RBP18.59■□□□□ 0.57
USP48-210ENST00000489108 FAM186AA6NE01 2351 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 FSD2A1L4K1 749 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 MGEA5O60502 916 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 NBL1P41271 181 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 KRT76Q01546 638 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 PLPP4Q5VZY2 271 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 PDE12Q6L8Q7 609 aaKnown RBP18.58■□□□□ 0.56
USP48-210ENST00000489108 LLGL2Q6P1M3 1020 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 TMEM105Q8N8V8 129 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 COLGALT1Q8NBJ5 622 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 TSHZ2Q9NRE2 1034 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 CDH22Q9UJ99 828 aa18.58■□□□□ 0.56
USP48-210ENST00000489108 HIP1O00291 1037 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 SRGAP2BP0DMP2 458 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 TRDNQ13061 729 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 ADAM2Q99965 735 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 IL25Q9H293 177 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 ERVK-5Q9HDB9 667 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 UBIAD1Q9Y5Z9 338 aa18.57■□□□□ 0.56
USP48-210ENST00000489108 KDM3AQ9Y4C1 1321 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 ERICH2A1L162 156 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 BRD1O95696 1058 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 MTMR1Q13613 665 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 WTAPQ15007 396 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 PLCB4Q15147 1175 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 UBALD2Q8IYN6 164 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 NME8Q8N427 588 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 RASGRP4Q8TDF6 673 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 SMOC2Q9H3U7 446 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 OSBPL3Q9H4L5 887 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 AZI2Q9H6S1 392 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 CWH43Q9H720 699 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 CDHR5Q9HBB8 845 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 SORCS3Q9UPU3 1222 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 GINS2Q9Y248 185 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 NOC2LQ9Y3T9 749 aaKnown RBP18.56■□□□□ 0.56
USP48-210ENST00000489108 NR2E1Q9Y466 385 aa18.56■□□□□ 0.56
USP48-210ENST00000489108 SMIM35A0A1B0GVV1 85 aa18.55■□□□□ 0.56
USP48-210ENST00000489108 HIDE1A8MVS5 230 aa18.55■□□□□ 0.56
USP48-210ENST00000489108 HOXB8P17481 243 aaPredicted RBP18.55■□□□□ 0.56
USP48-210ENST00000489108 MTMR3Q13615 1198 aa18.55■□□□□ 0.56
USP48-210ENST00000489108 MTHFD1LQ6UB35 978 aa18.55■□□□□ 0.56
USP48-210ENST00000489108 SLC24A5Q71RS6 500 aa18.55■□□□□ 0.56
USP48-210ENST00000489108 MRPS27Q92552 414 aaKnown RBP18.55■□□□□ 0.56
USP48-210ENST00000489108 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
USP48-210ENST00000489108 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
USP48-210ENST00000489108 TCF25Q9BQ70 676 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms