RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 COL1A2P08123 1366 aa16.12■□□□□ 0.17
BRCA1-218ENST00000489037 TMEM265A0A087WTH1 108 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 MBLAC1A4D2B0 266 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-218ENST00000489037 BTBD18B2RXH4 712 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 M0QZ92 97 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 NBNO60934 754 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 ATP2A2P16615 1042 aaKnown RBP16.11■□□□□ 0.17
BRCA1-218ENST00000489037 RPAINQ86UA6 219 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 PHOSPHO2Q8TCD6 241 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 BBXQ8WY36 941 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-218ENST00000489037 SEPT8Q92599 483 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 SLC9A7Q96T83 725 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 UNC45AQ9H3U1 944 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 NRBP2Q9NSY0 501 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 CEP131Q9UPN4 1083 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 MAFBQ9Y5Q3 323 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-218ENST00000489037 GBF1Q92538 1859 aa16.11■□□□□ 0.17
BRCA1-218ENST00000489037 LOXHD1Q8IVV2 1947 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 ABHD14A-ACY1A0A1B0GW23 586 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 GRXCR1A8MXD5 290 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 KIF28PB7ZC32 967 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 TBX3O15119 743 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 PSMD10O75832 226 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 DNAJB2P25686 324 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 GUCY1B3Q02153 619 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 FAM26DQ5JW98 314 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 MARCH8Q5T0T0 291 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 IER5Q5VY09 327 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 Q7L0L9 218 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 TRMT1LQ7Z2T5 733 aaKnown RBP16.1■□□□□ 0.17
BRCA1-218ENST00000489037 DNAJB3Q8WWF6 145 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 TIFAQ96CG3 184 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 VWCEQ96DN2 955 aa16.1■□□□□ 0.17
BRCA1-218ENST00000489037 FAM49AQ9H0Q0 323 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-218ENST00000489037 SLC37A4O43826 429 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 KLRC1P26715 233 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 TRAF7Q6Q0C0 670 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 NME8Q8N427 588 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 ETNPPLQ8TBG4 499 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 TRAPPC12Q8WVT3 735 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 GJA10Q969M2 543 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 FAM161BQ96MY7 647 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 PBX4Q9BYU1 374 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 BACH2Q9BYV9 841 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 MICAL3Q7RTP6 2002 aa16.09■□□□□ 0.17
BRCA1-218ENST00000489037 LAMA3Q16787 3333 aa16.08■□□□□ 0.17
BRCA1-218ENST00000489037 SMIM35A0A1B0GVV1 85 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 DKC1O60832 514 aaKnown RBP eCLIP16.08■□□□□ 0.16
BRCA1-218ENST00000489037 MRPS6P82932 125 aaKnown RBP16.08■□□□□ 0.16
BRCA1-218ENST00000489037 MBTPS1Q14703 1052 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 GPNMBQ14956 572 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 EARS2Q5JPH6 523 aaKnown RBP16.08■□□□□ 0.16
BRCA1-218ENST00000489037 DBF4BQ8NFT6 615 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 APBB2Q92870 758 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 TNFRSF25Q93038 417 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 TMX3Q96JJ7 454 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 ZBED2Q9BTP6 218 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 SEMA6BQ9H3T3 888 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 MTMR10Q9NXD2 777 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 PCDHA11Q9Y5I1 949 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 IGSF9BQ9UPX0 1349 aa16.08■□□□□ 0.16
BRCA1-218ENST00000489037 FAM205CA6NFA0 338 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 MAGEB2O15479 319 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 OATP04181 439 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 ATP4AP20648 1035 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 PLEKHG4Q58EX7 1191 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 FBXO18Q8NFZ0 1043 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 FOXP1Q9H334 677 aaPredicted RBP16.07■□□□□ 0.16
BRCA1-218ENST00000489037 SLC28A3Q9HAS3 691 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 KCNMB3Q9NPA1 279 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 TRPV2Q9Y5S1 764 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 CDY2AQ9Y6F7 541 aa16.07■□□□□ 0.16
BRCA1-218ENST00000489037 CHRNA1P02708 482 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 AMHP03971 560 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 TMOD1P28289 359 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 PBX2P40425 430 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 RABGGTBP53611 331 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 WDR5P61964 334 aaKnown RBP16.06■□□□□ 0.16
BRCA1-218ENST00000489037 PRKCEQ02156 737 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 PPP2R5CQ13362 524 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 CALCRLQ16602 461 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 HERC6Q8IVU3 1022 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 METTL13Q8N6R0 699 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
BRCA1-218ENST00000489037 ZNF576Q9H609 170 aa16.06■□□□□ 0.16
BRCA1-218ENST00000489037 NOL7Q9UMY1 257 aaKnown RBP16.06■□□□□ 0.16
BRCA1-218ENST00000489037 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
BRCA1-218ENST00000489037 NEMFO60524 1076 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 GHRP10912 638 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 PSMC5P62195 406 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 MGAT3Q09327 533 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 XKR3Q5GH77 459 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 NCAPH2Q6IBW4 605 aa16.05■□□□□ 0.16
BRCA1-218ENST00000489037 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms