RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 ABHD16BQ9H3Z7 469 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 TSPY26PQ9H489 355 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZSWIM4Q9H7M6 989 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 KBTBD4Q9NVX7 518 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 ANO10Q9NW15 660 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 GJD2Q9UKL4 321 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 PCDHA5Q9Y5H7 936 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 PCDHA10Q9Y5I2 948 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 SYNGAP1Q96PV0 1343 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 PLXNA1Q9UIW2 1896 aa8.45□□□□□ -1.06
APOBEC3A-203ENST00000488758 KIAA1217Q5T5P2 1943 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 E9PMD0 336 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARHGAP33O14559 1287 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 BACH1O14867 736 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 SNAI1O95863 264 aaPredicted RBP8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 PLA2G4BP0C869 781 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 UBA1P22314 1058 aaKnown RBP8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 QARSP47897 775 aaKnown RBP8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 ACTR2P61160 394 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 PSMC5P62195 406 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 TYRO3Q06418 890 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 ACVR2BQ13705 512 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 NAALADL2Q58DX5 795 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 OLFML2BQ68BL8 750 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 IQSEC1Q6DN90 963 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 TAPT1Q6NXT6 567 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 METTL7BQ6UX53 244 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 KCNK18Q7Z418 384 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 BANK1Q8NDB2 785 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 SEPT1Q8WYJ6 367 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 USP6NLQ92738 828 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 GSDMAQ96QA5 445 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 APBA2Q99767 749 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 C7orf25Q9BPX7 421 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 BLZF1Q9H2G9 400 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 BCAS3Q9H6U6 928 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 PDGFCQ9NRA1 345 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 BLOC1S4Q9NUP1 217 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 RMND1Q9NWS8 449 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 TUBE1Q9UJT0 475 aa8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZHX1Q9UKY1 873 aaPredicted RBP8.44□□□□□ -1.06
APOBEC3A-203ENST00000488758 TNRC18O15417 2968 aaPredicted RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 DOCK3Q8IZD9 2030 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 A0A087WWV3 80 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 RBM47A0AV96 593 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARHGEF35A5YM69 484 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 GPR25O00155 361 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 BIN1O00499 593 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 NOP56O00567 594 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 FARP2O94887 1054 aaPredicted RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARIH2O95376 493 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 EYA4O95677 639 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCNE2O96020 404 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 GH1P01241 217 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 SUPT20HL2P0C7V6 817 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 XRCC6P12956 609 aaKnown RBP eCLIP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 CTGFP29279 349 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 CASP1P29466 404 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ADCYAP1R1P41586 468 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 SARSP49591 514 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 NLRP12P59046 1061 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 PSMC6P62333 389 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 DPYDQ12882 1025 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 CUL4BQ13620 913 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 LAMC2Q13753 1193 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 STX1AQ16623 288 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 CELF3Q5SZQ8 465 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 MFSD14CQ5VZR4 134 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 FAM160B1Q5W0V3 765 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ISM2Q6H9L7 571 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 SWSAP1Q6NVH7 229 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCDC62Q6P9F0 684 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ABHD15Q6UXT9 468 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 OTUD6AQ7L8S5 288 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 C4orf19Q8IY42 314 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 TRMT44Q8IYL2 757 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 SYT2Q8N9I0 419 aaPredicted RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 PIGOQ8TEQ8 1089 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ATP6V0A1Q93050 837 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ERO1AQ96HE7 468 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 TRIM47Q96LD4 638 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 CCDC43Q96MW1 224 aaKnown RBP8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 SPATA33Q96N06 139 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 KCNK17Q96T54 332 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 MTRQ99707 1265 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 LXNQ9BS40 222 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 FUCA2Q9BTY2 467 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ARHGAP39Q9C0H5 1083 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 SAGE1Q9NXZ1 904 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 GABBR1Q9UBS5 961 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 GABRQQ9UN88 632 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 ZNF236Q9UL36 1845 aa8.43□□□□□ -1.06
APOBEC3A-203ENST00000488758 MCM3APO60318 1980 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 GSTTP1A0A1W2PQM5 241 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 GOLGA6L3A6NEY3 463 aa8.42□□□□□ -1.06
APOBEC3A-203ENST00000488758 MYMKA6NI61 221 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms