RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
SNU13-208ENST00000488571 CLUL1Q15846 466 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 RTN4RL1Q86UN2 441 aaPredicted RBP13.05□□□□□ -0.32
SNU13-208ENST00000488571 ALYREFQ86V81 257 aaKnown RBP13.05□□□□□ -0.32
SNU13-208ENST00000488571 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 SEPT1Q8WYJ6 367 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 PCYT2Q99447 389 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
SNU13-208ENST00000488571 UBIAD1Q9Y5Z9 338 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 CDY2AQ9Y6F7 541 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 TRIOO75962 3097 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 ZNF318Q5VUA4 2279 aa13.05□□□□□ -0.32
SNU13-208ENST00000488571 LINC01565O15544 149 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 SGSM2O43147 1006 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 DDAH1O94760 285 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 CD52P31358 61 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 MRPS6P82932 125 aaKnown RBP13.04□□□□□ -0.32
SNU13-208ENST00000488571 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
SNU13-208ENST00000488571 CSPP1Q1MSJ5 1256 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 TSHZ1Q6ZSZ6 1077 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 HFE2Q6ZVN8 426 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 RSPH3Q86UC2 560 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 CMTR1Q8N1G2 835 aaKnown RBP13.04□□□□□ -0.32
SNU13-208ENST00000488571 SRBD1Q8N5C6 995 aaKnown RBP13.04□□□□□ -0.32
SNU13-208ENST00000488571 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
SNU13-208ENST00000488571 RUFY2Q8WXA3 655 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 MAP4K1Q92918 833 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 PLVAPQ9BX97 442 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 ALG13Q9NP73 1137 aaKnown RBP13.04□□□□□ -0.32
SNU13-208ENST00000488571 ERAP1Q9NZ08 941 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 PKD2L1Q9P0L9 805 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 PLAGL2Q9UPG8 496 aa13.04□□□□□ -0.32
SNU13-208ENST00000488571 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
SNU13-208ENST00000488571 CSPG5O95196 566 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 INSRRP14616 1297 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 DNAJB1P25685 340 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 KIF5BP33176 963 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 NHLH1Q02575 133 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 ADAM15Q13444 863 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 SMAD4Q13485 552 aaKnown RBP13.03□□□□□ -0.32
SNU13-208ENST00000488571 MTMR1Q13613 665 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 UBE2SQ16763 222 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 GLG1Q92896 1179 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 P2RX5Q93086 422 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 CDHR1Q96JP9 859 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 FBXL18Q96ME1 805 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 SMARCAD1Q9H4L7 1026 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 PSTPIP2Q9H939 334 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
SNU13-208ENST00000488571 MUTYHQ9UIF7 546 aa13.03□□□□□ -0.32
SNU13-208ENST00000488571 PLXNA4Q9HCM2 1894 aa13.02□□□□□ -0.32
SNU13-208ENST00000488571 ITGB1P05556 798 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 RXRAP19793 462 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 IGBP1P78318 339 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
SNU13-208ENST00000488571 ADGRD2Q7Z7M1 963 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 SPPL3Q8TCT6 385 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 MSLNLQ96KJ4 702 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 MTA3Q9BTC8 594 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 UPF3BQ9BZI7 483 aaKnown RBP13.02□□□□□ -0.33
SNU13-208ENST00000488571 IGFLR1Q9H665 355 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 JADE2Q9NQC1 790 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.33
SNU13-208ENST00000488571 SQORQ9Y6N5 450 aa13.02□□□□□ -0.33
SNU13-208ENST00000488571 TECTAO75443 2155 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 RRN3P2A6NIE6 340 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 SH2B2O14492 632 aaPredicted RBP13.01□□□□□ -0.33
SNU13-208ENST00000488571 PRC1O43663 620 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 MRE11P49959 708 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 TMEM62Q0P6H9 643 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 RNF135Q8IUD6 432 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 NPAS4Q8IUM7 802 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
SNU13-208ENST00000488571 TRAPPC12Q8WVT3 735 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 POP1Q99575 1024 aaKnown RBP13.01□□□□□ -0.33
SNU13-208ENST00000488571 FAM49AQ9H0Q0 323 aaPredicted RBP13.01□□□□□ -0.33
SNU13-208ENST00000488571 KCNH6Q9H252 994 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
SNU13-208ENST00000488571 CLEC1BQ9P126 229 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 CD207Q9UJ71 328 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 PADI3Q9ULW8 664 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 PCDHA6Q9UN73 950 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 PCDHA8Q9Y5H6 950 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 IGSF9BQ9UPX0 1349 aa13.01□□□□□ -0.33
SNU13-208ENST00000488571 STXBP3O00186 592 aa13□□□□□ -0.33
SNU13-208ENST00000488571 MAFGO15525 162 aa13□□□□□ -0.33
SNU13-208ENST00000488571 EYA4O95677 639 aa13□□□□□ -0.33
SNU13-208ENST00000488571 GNAQP50148 359 aa13□□□□□ -0.33
SNU13-208ENST00000488571 GATMP50440 423 aa13□□□□□ -0.33
SNU13-208ENST00000488571 PLCB2Q00722 1185 aa13□□□□□ -0.33
SNU13-208ENST00000488571 PLCB4Q15147 1175 aa13□□□□□ -0.33
SNU13-208ENST00000488571 NAALADL2Q58DX5 795 aa13□□□□□ -0.33
SNU13-208ENST00000488571 IER5Q5VY09 327 aa13□□□□□ -0.33
SNU13-208ENST00000488571 CASC1Q6TDU7 716 aa13□□□□□ -0.33
SNU13-208ENST00000488571 RAB11FIP4Q86YS3 637 aa13□□□□□ -0.33
SNU13-208ENST00000488571 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
SNU13-208ENST00000488571 CYP2W1Q8TAV3 490 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms