RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 PAN2Q504Q3 1202 aaKnown RBP12.52□□□□□ -0.41
LCN2-206ENST00000488391 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
LCN2-206ENST00000488391 RTN4RL1Q86UN2 441 aaPredicted RBP12.52□□□□□ -0.41
LCN2-206ENST00000488391 EFHBQ8N7U6 833 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 KLHL23Q8NBE8 558 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 POF1BQ8WVV4 589 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 P2RX5Q93086 422 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 ZNF274Q96GC6 653 aaPredicted RBP12.52□□□□□ -0.41
LCN2-206ENST00000488391 TCEANC2Q96MN5 208 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 BARX2Q9UMQ3 279 aaPredicted RBP12.52□□□□□ -0.41
LCN2-206ENST00000488391 USP15Q9Y4E8 981 aaPredicted RBP12.52□□□□□ -0.41
LCN2-206ENST00000488391 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.52□□□□□ -0.41
LCN2-206ENST00000488391 PCDHGC5Q9Y5F6 944 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 NRCAMQ92823 1304 aa12.52□□□□□ -0.41
LCN2-206ENST00000488391 PALM3A6NDB9 673 aaPredicted RBP12.51□□□□□ -0.41
LCN2-206ENST00000488391 LIFRP42702 1097 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 VCPP55072 806 aaKnown RBP12.51□□□□□ -0.41
LCN2-206ENST00000488391 COASYQ13057 564 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 CBX2Q14781 532 aaPredicted RBP12.51□□□□□ -0.41
LCN2-206ENST00000488391 SART3Q15020 963 aaKnown RBP12.51□□□□□ -0.41
LCN2-206ENST00000488391 ME3Q16798 604 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 FBXO47Q5MNV8 452 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 CYB5R4Q7L1T6 521 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 SGMS1Q86VZ5 419 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 DNAJB3Q8WWF6 145 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 PIBF1Q8WXW3 757 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 ATOH1Q92858 354 aaPredicted RBP12.51□□□□□ -0.41
LCN2-206ENST00000488391 BRF1Q92994 677 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 INPP4AQ96PE3 977 aaPredicted RBP12.51□□□□□ -0.41
LCN2-206ENST00000488391 AGO3Q9H9G7 860 aaKnown RBP12.51□□□□□ -0.41
LCN2-206ENST00000488391 CHMP5Q9NZZ3 219 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 CDY2AQ9Y6F7 541 aa12.51□□□□□ -0.41
LCN2-206ENST00000488391 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
LCN2-206ENST00000488391 PER2O15055 1255 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 FIBPO43427 364 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 PFKFB2O60825 505 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 GLP2RO95838 553 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 IBSPP21815 317 aaPredicted RBP12.5□□□□□ -0.41
LCN2-206ENST00000488391 MARK3P27448 753 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 AVPR2P30518 371 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 CD52P31358 61 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 RBM10P98175 930 aaKnown RBP12.5□□□□□ -0.41
LCN2-206ENST00000488391 SIGLEC14Q08ET2 396 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 PPFIA1Q13136 1202 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 SEC23AQ15436 765 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 NAALADL2Q58DX5 795 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 TAF2Q6P1X5 1199 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
LCN2-206ENST00000488391 MICAL1Q8TDZ2 1067 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 LINC01599Q8WXQ3 324 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 ZBTB10Q96DT7 871 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 PHF7Q9BWX1 381 aaPredicted RBP12.5□□□□□ -0.41
LCN2-206ENST00000488391 SLKQ9H2G2 1235 aaPredicted RBP12.5□□□□□ -0.41
LCN2-206ENST00000488391 TLE6Q9H808 572 aa12.5□□□□□ -0.41
LCN2-206ENST00000488391 PNMA6FA0A0J9YX94 578 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 ERICH2A1L162 156 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 H0Y858 1186 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 CYTH3O43739 400 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 STAM2O75886 525 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 LARGE1O95461 756 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
LCN2-206ENST00000488391 TCF7P36402 384 aaPredicted RBP12.49□□□□□ -0.41
LCN2-206ENST00000488391 GATMP50440 423 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 RCAN1P53805 252 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 IGBP1P78318 339 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 TRAF1Q13077 416 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 GRIK4Q16099 956 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 MARCH8Q5T0T0 291 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 CRIPAKQ8N1N5 446 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 IGDCC4Q8TDY8 1250 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 GTF3C6Q969F1 213 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 ASIC4Q96FT7 647 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 LRRC2Q9BYS8 371 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 FAM49AQ9H0Q0 323 aaPredicted RBP12.49□□□□□ -0.41
LCN2-206ENST00000488391 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 TLR9Q9NR96 1032 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 TUBE1Q9UJT0 475 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 USP34Q70CQ2 3546 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 MYO10Q9HD67 2058 aa12.49□□□□□ -0.41
LCN2-206ENST00000488391 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
LCN2-206ENST00000488391 NID2Q14112 1375 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 GSTTP1A0A1W2PQM5 241 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 IFIT3O14879 490 aaKnown RBP12.48□□□□□ -0.41
LCN2-206ENST00000488391 ATP9AO75110 1047 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 NUCB2P80303 420 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 MRPS6P82932 125 aaKnown RBP12.48□□□□□ -0.41
LCN2-206ENST00000488391 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 APOBRQ0VD83 1088 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 GRM4Q14833 912 aa12.48□□□□□ -0.41
LCN2-206ENST00000488391 NPAS4Q8IUM7 802 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms