RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 KIAA1683Q9H0B3 1180 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 AKTIPQ9H8T0 292 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 CWC22Q9HCG8 908 aaKnown RBP7.05□□□□□ -1.28
CDHR3-213ENST00000488386 GINM1Q9NU53 330 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 FBXO28Q9NVF7 368 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 FLRT1Q9NZU1 646 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 GPN3Q9UHW5 284 aaPredicted RBP7.05□□□□□ -1.28
CDHR3-213ENST00000488386 SUPT16HQ9Y5B9 1047 aaKnown RBP7.05□□□□□ -1.28
CDHR3-213ENST00000488386 AK5Q9Y6K8 562 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 ALPK3Q96L96 1907 aa7.05□□□□□ -1.28
CDHR3-213ENST00000488386 GREB1LQ9C091 1923 aaPredicted RBP7.05□□□□□ -1.28
CDHR3-213ENST00000488386 A0A0G2JMZ2 1700 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 TTC41PQ6P2S7 1318 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 MYH4Q9Y623 1939 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 MSTNO14793 375 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 GIPC1O14908 333 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 FOXP2O15409 715 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 GLRX3O76003 335 aaKnown RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 SGPL1O95470 568 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 GJB1P08034 283 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 CTSHP09668 335 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 XRCC5P13010 732 aaKnown RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 EIF4BP23588 611 aaKnown RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 CCND3P30281 292 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 GATA4P43694 442 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 GJA8P48165 433 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 NRG1Q02297 640 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 PLS1Q14651 629 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 FAM47AQ5JRC9 791 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 VPS53Q5VIR6 699 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 Q6ZS46 218 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 RASGRP2Q7LDG7 609 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 PLEKHH3Q7Z736 793 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 CCAR1Q8IX12 1150 aaKnown RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 AMOTL1Q8IY63 956 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 TMEM130Q8N3G9 435 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 NPLOC4Q8TAT6 608 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 STK35Q8TDR2 534 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 SSBP4Q9BWG4 385 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 ARPP21Q9UBL0 812 aaPredicted RBP7.04□□□□□ -1.28
CDHR3-213ENST00000488386 FAM8A1Q9UBU6 413 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 SWAP70Q9UH65 585 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 TACC3Q9Y6A5 838 aa7.04□□□□□ -1.28
CDHR3-213ENST00000488386 A0A0D9SFI3 127 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 H0YGN5 161 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 ENC1O14682 589 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 ERC2O15083 957 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 PAGE1O75459 146 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 FLOT1O75955 427 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 FARP2O94887 1054 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-213ENST00000488386 TFRCP02786 760 aaKnown RBP7.03□□□□□ -1.28
CDHR3-213ENST00000488386 HMGCRP04035 888 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 MAOBP27338 520 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 PDE1AP54750 535 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 PSMD2Q13200 908 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 HDAC1Q13547 482 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-213ENST00000488386 ZMYM1Q5SVZ6 1142 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 FAM83BQ5T0W9 1011 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 TMED8Q6PL24 325 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-213ENST00000488386 LRRC47Q8N1G4 583 aaKnown RBP7.03□□□□□ -1.28
CDHR3-213ENST00000488386 DPF3Q92784 378 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 FAM227BQ96M60 508 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 MOV10L1Q9BXT6 1211 aaKnown RBP7.03□□□□□ -1.28
CDHR3-213ENST00000488386 VCPKMTQ9H867 229 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 MKNK2Q9HBH9 465 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 PAK6Q9NQU5 681 aaPredicted RBP7.03□□□□□ -1.28
CDHR3-213ENST00000488386 TPSG1Q9NRR2 321 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 TMX2Q9Y320 296 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 RABGAP1Q9Y3P9 1069 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 FRMPD3Q5JV73 1810 aa7.03□□□□□ -1.28
CDHR3-213ENST00000488386 NMT2O60551 498 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 CELA3AP09093 270 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 ZKSCAN1P17029 563 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-213ENST00000488386 TAL1P17542 331 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-213ENST00000488386 MAPK4P31152 587 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 PPARAQ07869 468 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 CACNB2Q08289 660 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-213ENST00000488386 NMIQ13287 307 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-213ENST00000488386 DOC2BQ14184 412 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 COG2Q14746 738 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 TMEM132BQ14DG7 1078 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 SBK1Q52WX2 424 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 MEI1Q5TIA1 1274 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 ANO1Q5XXA6 986 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 LBX2Q6XYB7 198 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 UBE2Q1Q7Z7E8 422 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 ZNF589Q86UQ0 364 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-213ENST00000488386 USP6NLQ92738 828 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 RILPL2Q969X0 211 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 GCC1Q96CN9 775 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 PAWRQ96IZ0 340 aaKnown RBP7.02□□□□□ -1.29
CDHR3-213ENST00000488386 FRMD6Q96NE9 622 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 NECAB3Q96P71 396 aaPredicted RBP7.02□□□□□ -1.29
CDHR3-213ENST00000488386 RUSC1Q9BVN2 902 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 SPATC1LQ9H0A9 340 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 NAPBQ9H115 298 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 PPP4R2Q9NY27 417 aa7.02□□□□□ -1.29
CDHR3-213ENST00000488386 CLIP2Q9UDT6 1046 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms