RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ARVCFO00192 962 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 AQP7O14520 342 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 EFCAB14O75071 495 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 SRGAP2CP0DJJ0 459 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 GRK2P25098 689 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 GRK3P35626 688 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 MASP1P48740 699 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 NANOS3P60323 173 aaKnown RBP4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 GUCY1A3Q02108 690 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 LRCH2Q5VUJ6 765 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 CNNM4Q6P4Q7 775 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 TRMT10BQ6PF06 316 aaKnown RBP4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 Q8N1Y9 231 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 PCDH19Q8TAB3 1148 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 EDAQ92838 391 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 ZSWIM3Q96MP5 696 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 ADOQ96SZ5 270 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 ZFYVE21Q9BQ24 234 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 IPPKQ9H8X2 491 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 ADAM29Q9UKF5 820 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 PLAAQ9Y263 795 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 ZNF652Q9Y2D9 606 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 COQ6Q9Y2Z9 468 aa4.15□□□□□ -1.75
R3HDM1-219ENST00000488035 A0A087X1B8 175 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 GSG1L2A8MUP6 293 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 NARSO43776 548 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 PDE8AO60658 829 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 SOD2P04179 222 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 CKMP06732 381 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 MYCLP1P12525 358 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 RPL11P62913 178 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 PTH1RQ03431 593 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 LSAMPQ13449 338 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 PCBP1Q15365 356 aaKnown RBP eCLIP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 SEPT7Q16181 437 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 LSM12Q3MHD2 195 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 USP39Q53GS9 565 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 CEP68Q76N32 757 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 FILIP1Q7Z7B0 1213 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 RALYLQ86SE5 291 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 LRRTM3Q86VH5 581 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 DNAJC10Q8IXB1 793 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 UBR7Q8N806 425 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 GIMAP8Q8ND71 665 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 ZCCHC14Q8WYQ9 949 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 CHAMP1Q96JM3 812 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 MAGEB10Q96LZ2 347 aaPredicted RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 LMF1Q96S06 567 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 KCNJ15Q99712 375 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 IFT57Q9NWB7 429 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 CLDND1Q9NY35 253 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 DTLQ9NZJ0 730 aa4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 ZFR2Q9UPR6 939 aaKnown RBP4.14□□□□□ -1.75
R3HDM1-219ENST00000488035 TCRBV5S4A2TA0A5A2 114 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 HGSO14964 777 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 FOXS1O43638 330 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 MYO1BO43795 1136 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 OPA1O60313 960 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 KPNA6O60684 536 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 GLRX3O76003 335 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 CNOT4O95628 575 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 CHGBP05060 677 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 JMJD7P0C870 316 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 PYGMP11217 842 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 POU3F3P20264 500 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 IGFALSP35858 605 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 GTF2A2P52657 109 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 KIZQ2M2Z5 673 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 FSTL4Q6MZW2 842 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 TCTN3Q6NUS6 607 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 TEPPQ6URK8 271 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 RNF180Q86T96 592 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 IFNL2Q8IZJ0 200 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 TRMT2BQ96GJ1 504 aaKnown RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 TMEM169Q96HH4 297 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 MTFR1LQ9H019 292 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 SLKQ9H2G2 1235 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 MAGEC2Q9UBF1 373 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 CBLCQ9ULV8 474 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 COA3Q9Y2R0 106 aaPredicted RBP4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 SLC4A7Q9Y6M7 1214 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 X6R8D5 127 aa4.13□□□□□ -1.75
R3HDM1-219ENST00000488035 CCDC66A2RUB6 948 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 WNT9AO14904 365 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 NKRFO15226 690 aaKnown RBP eCLIP4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 CLSTN1O94985 981 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 ASLP04424 464 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 VIL1P09327 827 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 COL6A2P12110 1019 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 COMTP21964 271 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 STAT3P40763 770 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 PAK1Q13153 545 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 PIK3R6Q5UE93 754 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 ZCCHC8Q6NZY4 707 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 Q6ZUG5 572 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 STRA8Q7Z7C7 330 aa4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 ZC3H7AQ8IWR0 971 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 CISD2Q8N5K1 135 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-219ENST00000488035 IGSF22Q8N9C0 903 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms