RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 ADAMTS3O15072 1205 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 ZBTB43O43298 467 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 EIF5BO60841 1220 aaKnown RBP9□□□□□ -0.97
NECTIN3-209ENST00000488016 CFBP00751 764 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 TFRCP02786 760 aaKnown RBP9□□□□□ -0.97
NECTIN3-209ENST00000488016 GJA8P48165 433 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 SEC13P55735 322 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 STK3Q13188 491 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 RTN1Q16799 776 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 GJC2Q5T442 439 aaPredicted RBP9□□□□□ -0.97
NECTIN3-209ENST00000488016 SH3PXD2AQ5TCZ1 1133 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 RNF207Q6ZRF8 634 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 RUFY3Q7L099 469 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 FANCBQ8NB91 859 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 TAAR1Q96RJ0 339 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 PPP1R12CQ9BZL4 782 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 KATNBL1Q9H079 304 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 PDGFCQ9NRA1 345 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 PCDHA1Q9Y5I3 950 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 ABCB11O95342 1321 aa9□□□□□ -0.97
NECTIN3-209ENST00000488016 PNMA6FA0A0J9YX94 578 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 EFSO43281 561 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 FARP2O94887 1054 aaPredicted RBP8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 LARGE1O95461 756 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 ADCYAP1R1P41586 468 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 METAP2P50579 478 aaKnown RBP eCLIP8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 ALDH5A1P51649 535 aaPredicted RBP8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 ZNF468Q5VIY5 522 aaPredicted RBP8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 C1orf53Q5VUE5 145 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 IL31RAQ8NI17 732 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 SYTL5Q8TDW5 730 aaPredicted RBP8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 PHKBQ93100 1093 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 PAWRQ96IZ0 340 aaKnown RBP8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 MTA3Q9BTC8 594 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 SPZ1Q9BXG8 430 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 AMNQ9BXJ7 453 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 PHACTR1Q9C0D0 580 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 SLC5A4Q9NY91 659 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 DDX20Q9UHI6 824 aaKnown RBP8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 HCN4Q9Y3Q4 1203 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 CYP46A1Q9Y6A2 500 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 PFASO15067 1338 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 VCANP13611 3396 aa8.99□□□□□ -0.97
NECTIN3-209ENST00000488016 ALPK3Q96L96 1907 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 SORBS3O60504 671 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 PGK1P00558 417 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 HMGB1P09429 215 aaKnown RBP8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 EIF2AK2P19525 551 aaKnown RBP8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 PSMA5P28066 241 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 PDIA3P30101 505 aaKnown RBP8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 KIF5BP33176 963 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 ACVR2BQ13705 512 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 UBE2SQ16763 222 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 WWC2Q6AWC2 1192 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 USP17L6PQ6QN14 398 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 MAMDC4Q6UXC1 1216 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 SYNE3Q6ZMZ3 975 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 HEATR3Q7Z4Q2 680 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 UBE2Q1Q7Z7E8 422 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 FCHSD1Q86WN1 690 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 TMTC2Q8N394 836 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 RRP36Q96EU6 259 aaKnown RBP8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 PGBD1Q96JS3 809 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 BTBD6Q96KE9 485 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 MAP3K14Q99558 947 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 AGXT2Q9BYV1 514 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 PDRG1Q9NUG6 133 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 OGDHLQ9ULD0 1010 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 DIS3Q9Y2L1 958 aaKnown RBP8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 MRPL11Q9Y3B7 192 aaKnown RBP8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 SYNGAP1Q96PV0 1343 aa8.98□□□□□ -0.97
NECTIN3-209ENST00000488016 SEPT4O43236 478 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 EPB41L2O43491 1005 aaKnown RBP8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 DKK1O94907 266 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 CALM1P0DP23 149 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 CALM2P0DP24 149 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 CALM3P0DP25 149 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 AK2P54819 239 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 PCBP4P57723 403 aaKnown RBP8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 TAPT1Q6NXT6 567 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 NECAB1Q8N987 351 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 PPP1R13LQ8WUF5 828 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 DPF3Q92784 378 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 COPS5Q92905 334 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 FERMT2Q96AC1 680 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 KIF2CQ99661 725 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 TM6SF1Q9BZW5 370 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 PRO3102Q9H379 93 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 HCN2Q9UL51 889 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 TPCN1Q9ULQ1 816 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 CNPY2Q9Y2B0 182 aa8.97□□□□□ -0.97
NECTIN3-209ENST00000488016 ARIH2O95376 493 aa8.96□□□□□ -0.98
NECTIN3-209ENST00000488016 MYCLP12524 364 aaPredicted RBP8.96□□□□□ -0.98
NECTIN3-209ENST00000488016 HSD17B4P51659 736 aa8.96□□□□□ -0.98
NECTIN3-209ENST00000488016 BEX3Q00994 111 aa8.96□□□□□ -0.98
NECTIN3-209ENST00000488016 ST3GAL1Q11201 340 aa8.96□□□□□ -0.98
NECTIN3-209ENST00000488016 NTRK3Q16288 839 aa8.96□□□□□ -0.98
NECTIN3-209ENST00000488016 ALYREFQ86V81 257 aaKnown RBP8.96□□□□□ -0.98
NECTIN3-209ENST00000488016 SCG3Q8WXD2 468 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms