RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RRAGDQ9NQL2 400 aaPredicted RBP10.47□□□□□ -0.73
SF3B1-211ENST00000487698 TBC1D7Q9P0N9 293 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 SLC9A2Q9UBY0 812 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 ODF2LQ9ULJ1 636 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 TELO2Q9Y4R8 837 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 COL4A3BPQ9Y5P4 624 aa10.47□□□□□ -0.73
SF3B1-211ENST00000487698 LOC102724159A0A0B4J2E5 919 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 YWHABP31946 246 aaKnown RBP10.46□□□□□ -0.73
SF3B1-211ENST00000487698 RARRES1P49788 294 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 CASP5P51878 434 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 COPB1P53618 953 aaKnown RBP10.46□□□□□ -0.73
SF3B1-211ENST00000487698 HUNKP57058 714 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 MAPK7Q13164 816 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 TBX2Q13207 712 aaPredicted RBP10.46□□□□□ -0.73
SF3B1-211ENST00000487698 ARID5BQ14865 1188 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 PWP2Q15269 919 aaKnown RBP10.46□□□□□ -0.73
SF3B1-211ENST00000487698 BMT2Q1RMZ1 405 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 LRRC55Q6ZSA7 311 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 LRRC8AQ8IWT6 810 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 KCTD10Q9H3F6 313 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 EFCC1Q9HA90 598 aa10.46□□□□□ -0.73
SF3B1-211ENST00000487698 ARHGEF35A5YM69 484 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 B4DLN1 442 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 TEX33O43247 280 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 STBD1O95210 358 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 UBA1P22314 1058 aaKnown RBP10.46□□□□□ -0.74
SF3B1-211ENST00000487698 MSNP26038 577 aaKnown RBP10.46□□□□□ -0.74
SF3B1-211ENST00000487698 ACTR2P61160 394 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 CCNA1P78396 465 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 LRMPQ12912 555 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 PADI6Q6TGC4 694 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 ABHD15Q6UXT9 468 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 RASAL3Q86YV0 1011 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 DAW1Q8N136 415 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 ANKRD13CQ8N6S4 541 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 FIZ1Q96SL8 496 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 PARK7Q99497 189 aaKnown RBP10.46□□□□□ -0.74
SF3B1-211ENST00000487698 ZHX3Q9H4I2 956 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 SEL1LQ9UBV2 794 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 PASKQ96RG2 1323 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 IGSF9BQ9UPX0 1349 aa10.46□□□□□ -0.74
SF3B1-211ENST00000487698 DCAF8L1A6NGE4 600 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF862O60290 1169 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF500O60304 480 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-211ENST00000487698 KIF20AO95235 890 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ATG7O95352 703 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 PSAPP07602 524 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 HOXD13P35453 343 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 PTPN21Q16825 1174 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 SPECC1LQ69YQ0 1117 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ARMCX5Q6P1M9 558 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 SEPT14Q6ZU15 432 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 CCDC60Q8IWA6 550 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-211ENST00000487698 FAM114A1Q8IWE2 563 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ZC3H3Q8IXZ2 948 aaKnown RBP10.45□□□□□ -0.74
SF3B1-211ENST00000487698 CCDC150Q8NCX0 1101 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ANKRD20A12PQ8NF67 263 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 CNOT6LQ96LI5 555 aaKnown RBP10.45□□□□□ -0.74
SF3B1-211ENST00000487698 MPHOSPH6Q99547 160 aaKnown RBP10.45□□□□□ -0.74
SF3B1-211ENST00000487698 PARVGQ9HBI0 331 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ANKEF1Q9NU02 776 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 TAB2Q9NYJ8 693 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ADGRA2Q96PE1 1338 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 SYNGAP1Q96PV0 1343 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 FARP2O94887 1054 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-211ENST00000487698 FAM13AO94988 1023 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 SUPT20HL2P0C7V6 817 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 MYBP10242 640 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 TGFB3P10600 412 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 FAM110CQ1W6H9 321 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ANO5Q75V66 913 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 SAPCD2Q86UD0 394 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ABRAQ8N0Z2 381 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ZNF507Q8TCN5 953 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ATP6V0A1Q93050 837 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 TSG101Q99816 390 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 GABBR1Q9UBS5 961 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 PYCARDQ9ULZ3 195 aa10.45□□□□□ -0.74
SF3B1-211ENST00000487698 ITIH6Q6UXX5 1313 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 DOCK3Q8IZD9 2030 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 IGKV6D-21A0A0A0MT36 114 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 TMEM150BA6NC51 233 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 LGALS16A8MUM7 142 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 BACH1O14867 736 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 N4BP3O15049 544 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 EIF3DO15371 548 aaKnown RBP eCLIP10.44□□□□□ -0.74
SF3B1-211ENST00000487698 HIP1RO75146 1068 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 CCZ1BP86790 482 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 CCZ1P86791 482 aaPredicted RBP10.44□□□□□ -0.74
SF3B1-211ENST00000487698 EDRF1Q3B7T1 1238 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 WDR78Q5VTH9 848 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 MIS18BP1Q6P0N0 1132 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 PPP4R3CPQ6ZMV5 832 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 CYFIP1Q7L576 1253 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 KIAA1524Q8TCG1 905 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 EEF2KMTQ96G04 330 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 TIPINQ9BVW5 301 aa10.44□□□□□ -0.74
SF3B1-211ENST00000487698 MRPL44Q9H9J2 332 aaKnown RBP10.44□□□□□ -0.74
SF3B1-211ENST00000487698 POLD4Q9HCU8 107 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms