RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 EIF2AK2P19525 551 aaKnown RBP13.66□□□□□ -0.22
TRIM56-204ENST00000487252 CD52P31358 61 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 CEP85Q6P2H3 762 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 IFNL3Q8IZI9 196 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 NETO1Q8TDF5 533 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 NELL1Q92832 810 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 SECISBP2LQ93073 1101 aaKnown RBP13.66□□□□□ -0.22
TRIM56-204ENST00000487252 ACSF2Q96CM8 615 aaPredicted RBP13.66□□□□□ -0.22
TRIM56-204ENST00000487252 CWH43Q9H720 699 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 HCSTQ9UBK5 93 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 FBXO4Q9UKT5 387 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 SIT1Q9Y3P8 196 aa13.66□□□□□ -0.22
TRIM56-204ENST00000487252 C2orf71A6NGG8 1288 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 STK25O00506 426 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 SORBS3O60504 671 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 CLASP2O75122 1294 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 IFIT2P09913 472 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 PDHBP11177 359 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 ARHGAP4P98171 946 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 HSP90AB4PQ58FF6 505 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 SPECC1Q5M775 1068 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 RARS2Q5T160 578 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 ARHGEF16Q5VV41 709 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 OTOP3Q7RTS5 596 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 C12orf76Q8N812 135 aaPredicted RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 MRPL43Q8N983 215 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 FEZF2Q8TBJ5 459 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 GPR20Q99678 358 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 BCAS3Q9H6U6 928 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 ENTPD7Q9NQZ7 604 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 PUF60Q9UHX1 559 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 SMG5Q9UPR3 1016 aaKnown RBP13.65□□□□□ -0.22
TRIM56-204ENST00000487252 CDY2AQ9Y6F7 541 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 WDFY3Q8IZQ1 3526 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 IGF2RP11717 2491 aa13.65□□□□□ -0.22
TRIM56-204ENST00000487252 MBLAC1A4D2B0 266 aaPredicted RBP13.64□□□□□ -0.23
TRIM56-204ENST00000487252 GPAA1O43292 621 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 CFHP08603 1231 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 SNHG28P0DPA3 235 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 PPARAQ07869 468 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 USH1GQ495M9 461 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 KANK3Q6NY19 840 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 VSIG10LQ86VR7 867 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 APPBP2Q92624 585 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 DZANK1Q9NVP4 752 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
TRIM56-204ENST00000487252 DSPP15924 2871 aaKnown RBP13.63□□□□□ -0.23
TRIM56-204ENST00000487252 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 SLC3A2P08195 630 aaKnown RBP13.63□□□□□ -0.23
TRIM56-204ENST00000487252 LAG3P18627 525 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 SARSP49591 514 aaKnown RBP13.63□□□□□ -0.23
TRIM56-204ENST00000487252 GHRHRQ02643 423 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 SPOUT1Q5T280 376 aaKnown RBP13.63□□□□□ -0.23
TRIM56-204ENST00000487252 FAM43BQ6ZT52 329 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-204ENST00000487252 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 TRIM50Q86XT4 487 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 MCF2L2Q86YR7 1114 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 KDF1Q8NAX2 398 aaPredicted RBP13.63□□□□□ -0.23
TRIM56-204ENST00000487252 GPKOWQ92917 476 aaPredicted RBP eCLIP13.63□□□□□ -0.23
TRIM56-204ENST00000487252 KIF1BPQ96EK5 621 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 TMEM47Q9BQJ4 181 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 TMX1Q9H3N1 280 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 MLXIPQ9HAP2 919 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 PPP4R2Q9NY27 417 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 ZMIZ1Q9ULJ6 1067 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 PADI3Q9ULW8 664 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 C2orf16Q68DN1 1984 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 ABCB11O95342 1321 aa13.63□□□□□ -0.23
TRIM56-204ENST00000487252 HSPD1P10809 573 aaKnown RBP13.62□□□□□ -0.23
TRIM56-204ENST00000487252 TOP1P11387 765 aaKnown RBP13.62□□□□□ -0.23
TRIM56-204ENST00000487252 MARCH8Q5T0T0 291 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 PJA1Q8NG27 643 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 DNAJB3Q8WWF6 145 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 LRFN2Q9ULH4 789 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 CA14Q9ULX7 337 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 MIA3Q5JRA6 1907 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 IGSF9BQ9UPX0 1349 aa13.62□□□□□ -0.23
TRIM56-204ENST00000487252 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 TBC1D4O60343 1298 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 N4BP1O75113 896 aaKnown RBP13.61□□□□□ -0.23
TRIM56-204ENST00000487252 APPP05067 770 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 SRFP11831 508 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 HSD17B4P51659 736 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 MRPS6P82932 125 aaKnown RBP13.61□□□□□ -0.23
TRIM56-204ENST00000487252 SMC1AQ14683 1233 aaKnown RBP13.61□□□□□ -0.23
TRIM56-204ENST00000487252 LRSAM1Q6UWE0 723 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 METTL7BQ6UX53 244 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 CCDC149Q6ZUS6 474 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 STOX1Q6ZVD7 989 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 TMC7Q7Z402 723 aa13.61□□□□□ -0.23
TRIM56-204ENST00000487252 GPR149Q86SP6 731 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms