RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 CCDC60Q8IWA6 550 aaPredicted RBP11.53□□□□□ -0.56
NEK4-204ENST00000487068 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
NEK4-204ENST00000487068 RIT2Q99578 217 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.53□□□□□ -0.56
NEK4-204ENST00000487068 TTYH1Q9H313 450 aaPredicted RBP11.53□□□□□ -0.56
NEK4-204ENST00000487068 GABBR1Q9UBS5 961 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 SMC3Q9UQE7 1217 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 MYH11P35749 1972 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 VCANP13611 3396 aa11.52□□□□□ -0.56
NEK4-204ENST00000487068 TMEM265A0A087WTH1 108 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 DHX15O43143 795 aaKnown RBP11.52□□□□□ -0.57
NEK4-204ENST00000487068 NEMFO60524 1076 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 LGR5O75473 907 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 BAG4O95429 457 aaKnown RBP11.52□□□□□ -0.57
NEK4-204ENST00000487068 FGBP02675 491 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 PFKMP08237 780 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 CKBP12277 381 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 GJB2P29033 226 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 SFNP31947 248 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 RFC2P35250 354 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 SLC26A2P50443 739 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 HIC1Q14526 733 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 PLCB4Q15147 1175 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 EARS2Q5JPH6 523 aaKnown RBP11.52□□□□□ -0.57
NEK4-204ENST00000487068 MCTP1Q6DN14 999 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 OTOP2Q7RTS6 562 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 PLPPR4Q7Z2D5 763 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 SERINC5Q86VE9 423 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 SLC5A5Q92911 643 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
NEK4-204ENST00000487068 UNC45AQ9H3U1 944 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 DISC1Q9NRI5 854 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 NOL7Q9UMY1 257 aaKnown RBP11.52□□□□□ -0.57
NEK4-204ENST00000487068 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.52□□□□□ -0.57
NEK4-204ENST00000487068 PCDHA10Q9Y5I2 948 aa11.52□□□□□ -0.57
NEK4-204ENST00000487068 CYP3A7-CYP3A51PA0A087WV96 503 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 RRN3P2A6NIE6 340 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 M0QZ92 97 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 INSRRP14616 1297 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 CYP3A7P24462 503 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 CALCRLQ16602 461 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 ZNF618Q5T7W0 954 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 NCAPH2Q6IBW4 605 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 PPP4R3AQ6IN85 833 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 ABHD15Q6UXT9 468 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 SLFN12Q8IYM2 578 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 ETNPPLQ8TBG4 499 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 TNFRSF25Q93038 417 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 WNT8BQ93098 351 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 FAM167AQ96KS9 214 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 CTAGE1Q96RT6 745 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 PCYT2Q99447 389 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 IGSF9BQ9UPX0 1349 aa11.51□□□□□ -0.57
NEK4-204ENST00000487068 RSPH10B2B2RC85 870 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 HBP1O60381 514 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 PSMD10O75832 226 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 ATG7O95352 703 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
NEK4-204ENST00000487068 RSPH10BP0C881 870 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 MCM7P33993 719 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 KCNJ6P48051 423 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 PRKCEQ02156 737 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 TAF2Q6P1X5 1199 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 RUFY4Q6ZNE9 571 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 FBXO18Q8NFZ0 1043 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 ATP8B4Q8TF62 1192 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 ZBTB10Q96DT7 871 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 FAM20AQ96MK3 541 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 FOXP1Q9H334 677 aaPredicted RBP11.5□□□□□ -0.57
NEK4-204ENST00000487068 SEPT9Q9UHD8 586 aaPredicted RBP11.5□□□□□ -0.57
NEK4-204ENST00000487068 COL1A2P08123 1366 aa11.5□□□□□ -0.57
NEK4-204ENST00000487068 IGKV6D-21A0A0A0MT36 114 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 TBX3O15119 743 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 EDIL3O43854 480 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 CAND2O75155 1236 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 OATP04181 439 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 HOXC8P31273 242 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 RBL2Q08999 1139 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 BANK1Q8NDB2 785 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 RDM1Q8NG50 284 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 DNAJB3Q8WWF6 145 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 CCDC43Q96MW1 224 aaKnown RBP11.49□□□□□ -0.57
NEK4-204ENST00000487068 MBOAT7Q96N66 472 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 CEP131Q9UPN4 1083 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 GINS2Q9Y248 185 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 SLC4A7Q9Y6M7 1214 aa11.49□□□□□ -0.57
NEK4-204ENST00000487068 SPTBN5Q9NRC6 3674 aaKnown RBP11.49□□□□□ -0.57
NEK4-204ENST00000487068 CDH23Q9H251 3354 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 HSP90AA1P07900 732 aaKnown RBP11.48□□□□□ -0.57
NEK4-204ENST00000487068 TXKP42681 527 aa11.48□□□□□ -0.57
NEK4-204ENST00000487068 TMEM62Q0P6H9 643 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms