RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 TTC9BQ8N6N2 239 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 STRIP2Q9ULQ0 834 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 ZNF652Q9Y2D9 606 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 INPP5FQ9Y2H2 1132 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 PCDHA2Q9Y5H9 948 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 AFF2P51816 1311 aa5.91□□□□□ -1.46
SNRNP40-205ENST00000486941 LAMC1P11047 1609 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 CLTCL1P53675 1640 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 GPR42O15529 346 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 MSCO60682 206 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 COL6A1P12109 1028 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 RBM6P78332 1123 aaKnown RBP5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 SV2CQ496J9 727 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 SLC35F1Q5T1Q4 408 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 ACBD5Q5T8D3 534 aaPredicted RBP5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 TEPPQ6URK8 271 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 PROSER1Q86XN7 944 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 Q8N1X5 172 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 TMEM169Q96HH4 297 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 WWC2-AS2Q96NR7 200 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 PCDH18Q9HCL0 1135 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 CD248Q9HCU0 757 aa5.9□□□□□ -1.46
SNRNP40-205ENST00000486941 RPGRIP1LQ68CZ1 1315 aa5.9□□□□□ -1.47
SNRNP40-205ENST00000486941 NALCNQ8IZF0 1738 aa5.9□□□□□ -1.47
SNRNP40-205ENST00000486941 PNPLA6Q8IY17 1366 aa5.9□□□□□ -1.47
SNRNP40-205ENST00000486941 C1orf167Q5SNV9 1468 aa5.9□□□□□ -1.47
SNRNP40-205ENST00000486941 ZBTB7CA1YPR0 619 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 MEFVO15553 781 aaPredicted RBP5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 EMC4Q5J8M3 183 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 PHF19Q5T6S3 580 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 LARP1BQ659C4 914 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 PKN3Q6P5Z2 889 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 SPRED1Q7Z699 444 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 ZC3H18Q86VM9 953 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 PPIL6Q8IXY8 311 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 IGDCC4Q8TDY8 1250 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 DDX17Q92841 729 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 C8orf37Q96NL8 207 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 DTLQ9NZJ0 730 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 PPARGC1AQ9UBK2 798 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 NPFFR2Q9Y5X5 522 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 NAIPQ13075 1403 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 PTCH1Q13635 1447 aa5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 RRBP1Q9P2E9 1410 aaKnown RBP5.89□□□□□ -1.47
SNRNP40-205ENST00000486941 HGSO14964 777 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 LTBRP36941 435 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 NKX3-2P78367 333 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 KCNAB2Q13303 367 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 LSAMPQ13449 338 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 STEAP3Q658P3 488 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 RBM12BQ8IXT5 1001 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 DNERQ8NFT8 737 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 TOE1Q96GM8 510 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 LCORQ96JN0 433 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 ORAI2Q96SN7 254 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 SCAND2PQ9GZW5 306 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 PRAG1Q86YV5 1406 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 PPLO60437 1756 aa5.88□□□□□ -1.47
SNRNP40-205ENST00000486941 C9orf118A6NHY6 69 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 H7BY64 318 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 NAT2P11245 290 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 PRAMEF18Q5VWM3 479 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 SLC16A11Q8NCK7 471 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 CLEC4DQ8WXI8 215 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 JAM3Q9BX67 310 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 CLDND1Q9NY35 253 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 ACTR10Q9NZ32 417 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 PCDHB4Q9Y5E5 795 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 HFM1A2PYH4 1435 aa5.87□□□□□ -1.47
SNRNP40-205ENST00000486941 RGS12O14924 1447 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 ZNF536O15090 1300 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 LAMTOR5O43504 91 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 GJB6O95452 261 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 KCNJ6P48051 423 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 GTF2A2P52657 109 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 TMC5Q6UXY8 1006 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 DVL3Q92997 716 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 LRP2BPQ9P2M1 347 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 CROTQ9UKG9 612 aa5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 TRPC5Q9UL62 973 aaPredicted RBP5.86□□□□□ -1.47
SNRNP40-205ENST00000486941 COL22A1Q8NFW1 1626 aaPredicted RBP5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 NPHP3Q7Z494 1330 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 A0A1W2PQU0 124 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 DLX3O60479 287 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 DDAH1O94760 285 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 CPP00450 1065 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 FSHBP01225 129 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 PPP2R2AP63151 447 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 SLC10A6Q3KNW5 377 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 BORAQ6PGQ7 559 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 NUDT10Q8NFP7 164 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 NUDT11Q96G61 164 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 CCDC140Q96MF4 163 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 CCSER2Q9H7U1 834 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 PRKAG3Q9UGI9 489 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 TELO2Q9Y4R8 837 aa5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 MARF1Q9Y4F3 1742 aaKnown RBP5.85□□□□□ -1.47
SNRNP40-205ENST00000486941 LRPPRCP42704 1394 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms