RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 WRAP73Q9P2S5 460 aaPredicted RBP22.45■■□□□ 1.18
HPS3-206ENST00000486530 MRFAP1Q9Y605 127 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 WDR90Q96KV7 1748 aa22.45■■□□□ 1.18
HPS3-206ENST00000486530 UBE4BO95155 1302 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 IPO7O95373 1038 aaKnown RBP22.44■■□□□ 1.18
HPS3-206ENST00000486530 HOXD13P35453 343 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 ZNF569Q5MCW4 686 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 ZNF662Q6ZS27 426 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 PDCL2Q8N4E4 241 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 MNS1Q8NEH6 495 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 TAAR1Q96RJ0 339 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 HAUS4Q9H6D7 363 aa22.44■■□□□ 1.18
HPS3-206ENST00000486530 EIF3CLB5ME19 914 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 ADM5C9JUS6 153 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 DDX39AO00148 427 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 EPHB6O15197 1021 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 DHX15O43143 795 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 ERCC3P19447 782 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 EIF2AK2P19525 551 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 ZNF131P52739 623 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 HMGCS2P54868 508 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 PPP2R3AQ06190 1150 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 FRMD5Q7Z6J6 570 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 MYCT1Q8N699 235 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 EIF3CQ99613 913 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 RNF146Q9NTX7 359 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 TBC1D22BQ9NU19 505 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 CGNQ9P2M7 1197 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 ARHGEF35A5YM69 484 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 P4HBP07237 508 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 GUCY2CP25092 1073 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 RPL13P26373 211 aaKnown RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 ITGB3BPQ13352 177 aaPredicted RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 PRKG1Q13976 671 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 SULF1Q8IWU6 871 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 BANK1Q8NDB2 785 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 REPS2Q8NFH8 660 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 RMDN3Q96TC7 470 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 PXMP2Q9NR77 195 aa22.43■■□□□ 1.18
HPS3-206ENST00000486530 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.43■■□□□ 1.18
HPS3-206ENST00000486530 V9GYY5 206 aaPredicted RBP22.43■■□□□ 1.18
HPS3-206ENST00000486530 ASTN1O14525 1302 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 ZBTB39O15060 712 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 SLC16A3O15427 465 aaKnown RBP22.42■■□□□ 1.18
HPS3-206ENST00000486530 DSG3P32926 999 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 HERVK_113P62684 666 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 KCNMA1Q12791 1236 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 ELF2Q15723 593 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 XRRA1Q6P2D8 792 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.42■■□□□ 1.18
HPS3-206ENST00000486530 STXBP4Q6ZWJ1 553 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 SMCR8Q8TEV9 937 aaPredicted RBP22.42■■□□□ 1.18
HPS3-206ENST00000486530 WNK4Q96J92 1243 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 PDCD2LQ9BRP1 358 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 ZSWIM4Q9H7M6 989 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 PKD2L1Q9P0L9 805 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 ADAMTS5Q9UNA0 930 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 AFG3L2Q9Y4W6 797 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 LOC285556D6RIA3 1793 aa22.42■■□□□ 1.18
HPS3-206ENST00000486530 TUBB2AQ13885 445 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 NSMFQ6X4W1 530 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 BAP1Q92560 729 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 TUBB2BQ9BVA1 445 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 NUCKS1Q9H1E3 243 aaKnown RBP22.41■■□□□ 1.18
HPS3-206ENST00000486530 CEP72Q9P209 647 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 ARMCX3Q9UH62 379 aaPredicted RBP22.41■■□□□ 1.18
HPS3-206ENST00000486530 CTAGE9A4FU28 777 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 NR3C1P04150 777 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 NFIL3Q16649 462 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 ARHGEF16Q5VV41 709 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 USP50Q70EL3 339 aaPredicted RBP22.41■■□□□ 1.18
HPS3-206ENST00000486530 CACNA2D4Q7Z3S7 1137 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 SLC35F6Q8N357 371 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 CCDC155Q8N6L0 562 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 LRRN4CLQ8ND94 238 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 CCDC42Q96M95 316 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 CARD6Q9BX69 1037 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 TMOD4Q9NZQ9 345 aa22.41■■□□□ 1.18
HPS3-206ENST00000486530 LRRC53A6NM62 1247 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 SFI1A8K8P3 1242 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 EFCAB8A8MWE9 144 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 COG2Q14746 738 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 SNRNP48Q6IEG0 339 aaKnown RBP22.4■■□□□ 1.18
HPS3-206ENST00000486530 PDXDC1Q6P996 788 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 RRAGAQ7L523 313 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 KIAA1328Q86T90 577 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 METTL14Q9HCE5 456 aaKnown RBP22.4■■□□□ 1.18
HPS3-206ENST00000486530 DBR1Q9UK59 544 aaKnown RBP22.4■■□□□ 1.18
HPS3-206ENST00000486530 ZMYM2Q9UBW7 1377 aa22.4■■□□□ 1.18
HPS3-206ENST00000486530 TADA3O75528 432 aa22.39■■□□□ 1.18
HPS3-206ENST00000486530 LYPLA2O95372 231 aa22.39■■□□□ 1.18
HPS3-206ENST00000486530 MYCLP12524 364 aaPredicted RBP22.39■■□□□ 1.18
HPS3-206ENST00000486530 FAM178BQ8IXR5 827 aa22.39■■□□□ 1.18
HPS3-206ENST00000486530 LSM14BQ9BX40 385 aaKnown RBP22.39■■□□□ 1.18
HPS3-206ENST00000486530 BCAS3Q9H6U6 928 aa22.39■■□□□ 1.18
HPS3-206ENST00000486530 ZNF214Q9UL59 606 aaPredicted RBP22.39■■□□□ 1.18
HPS3-206ENST00000486530 SAMM50Q9Y512 469 aa22.39■■□□□ 1.18
HPS3-206ENST00000486530 RIPK3Q9Y572 518 aa22.39■■□□□ 1.18
HPS3-206ENST00000486530 SNCAIPQ9Y6H5 919 aa22.39■■□□□ 1.18
HPS3-206ENST00000486530 ATP2A1O14983 1001 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms