RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TEKT3Q9BXF9 490 aa14.58□□□□□ -0.08
CHMP3-208ENST00000486404 PRDM12Q9H4Q4 367 aa14.58□□□□□ -0.08
CHMP3-208ENST00000486404 PCDHA10Q9Y5I2 948 aa14.58□□□□□ -0.08
CHMP3-208ENST00000486404 COL1A2P08123 1366 aa14.58□□□□□ -0.08
CHMP3-208ENST00000486404 CDH23Q9H251 3354 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 MSH4O15457 936 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 ATG7O95352 703 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 TDP2O95551 362 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 MRPS6P82932 125 aaKnown RBP14.57□□□□□ -0.08
CHMP3-208ENST00000486404 INF2Q27J81 1249 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 LETM2Q2VYF4 491 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 C8orf34Q49A92 452 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 PLEKHG4Q58EX7 1191 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 SWSAP1Q6NVH7 229 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 MYOCDQ8IZQ8 938 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 SLC17A8Q8NDX2 589 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 DNAJB3Q8WWF6 145 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 PHF20Q9BVI0 1012 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 IFIH1Q9BYX4 1025 aaKnown RBP14.57□□□□□ -0.08
CHMP3-208ENST00000486404 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
CHMP3-208ENST00000486404 COL6A3P12111 3177 aa14.57□□□□□ -0.08
CHMP3-208ENST00000486404 IGKV6D-21A0A0A0MT36 114 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 HBP1O60381 514 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 CTDNEP1O95476 244 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 GHRP10912 638 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 SFNP31947 248 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 KRT2P35908 639 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 JAK3P52333 1124 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 FOSBP53539 338 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 TCTN1Q2MV58 587 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 Q4G0T1 1027 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 FAM26DQ5JW98 314 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 MARCH8Q5T0T0 291 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 IER5Q5VY09 327 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 TMCO2Q7Z6W1 182 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-208ENST00000486404 RPAINQ86UA6 219 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 SLC5A5Q92911 643 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 ZBTB10Q96DT7 871 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 FAM167AQ96KS9 214 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 RIT2Q99578 217 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 NAP1L4Q99733 375 aaKnown RBP14.56□□□□□ -0.08
CHMP3-208ENST00000486404 UPF2Q9HAU5 1272 aaKnown RBP14.56□□□□□ -0.08
CHMP3-208ENST00000486404 GABBR1Q9UBS5 961 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 CEP131Q9UPN4 1083 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 CDY2AQ9Y6F7 541 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 IGSF9BQ9UPX0 1349 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 RALGAPA2Q2PPJ7 1873 aa14.56□□□□□ -0.08
CHMP3-208ENST00000486404 CHD9Q3L8U1 2897 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 M0R2N6 131 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 DTNBO60941 627 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 IGFBP4P22692 258 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 TMEM62Q0P6H9 643 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 NPY5RQ15761 445 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 ZNF484Q5JVG2 852 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 MTHFD1LQ6UB35 978 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 MOXD1Q6UVY6 613 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 TSHZ1Q6ZSZ6 1077 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 PIK3AP1Q6ZUJ8 805 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 TRMT1LQ7Z2T5 733 aaKnown RBP14.55□□□□□ -0.08
CHMP3-208ENST00000486404 NEK8Q86SG6 692 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 NSUN7Q8NE18 718 aaKnown RBP14.55□□□□□ -0.08
CHMP3-208ENST00000486404 BBXQ8WY36 941 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-208ENST00000486404 DISC1Q9NRI5 854 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 LIMCH1Q9UPQ0 1083 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 PCDHA2Q9Y5H9 948 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 TRPV2Q9Y5S1 764 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 ARID2Q68CP9 1835 aa14.55□□□□□ -0.08
CHMP3-208ENST00000486404 MARCH6O60337 910 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 CCNT1O60563 726 aaKnown RBP14.54□□□□□ -0.08
CHMP3-208ENST00000486404 JAK2O60674 1132 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 GJB5O95377 273 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 CHRNA1P02708 482 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 GCFC2P16383 781 aaKnown RBP14.54□□□□□ -0.08
CHMP3-208ENST00000486404 PRKCEQ02156 737 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 MGAT3Q09327 533 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 MIER3Q7Z3K6 550 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 UNC45AQ9H3U1 944 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 GJB4Q9NTQ9 266 aa14.54□□□□□ -0.08
CHMP3-208ENST00000486404 CYP3A7-CYP3A51PA0A087WV96 503 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 SMIM35A0A1B0GVV1 85 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 OATP04181 439 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 CYP3A7P24462 503 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 KLRC1P26715 233 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 PAK2Q13177 524 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 LPIN1Q14693 890 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 FBXO47Q5MNV8 452 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.53□□□□□ -0.08
CHMP3-208ENST00000486404 CCDC83Q8IWF9 413 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 MICALL1Q8N3F8 863 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 RDM1Q8NG50 284 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 OXER1Q8TDS5 423 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 ARNTL2Q8WYA1 636 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 GJA10Q969M2 543 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 YME1L1Q96TA2 773 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 RAD9AQ99638 391 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 CERS4Q9HA82 394 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 GINS2Q9Y248 185 aa14.53□□□□□ -0.08
CHMP3-208ENST00000486404 MAFBQ9Y5Q3 323 aaPredicted RBP14.53□□□□□ -0.08
CHMP3-208ENST00000486404 COL4A6Q14031 1691 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms