RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 FAM167AQ96KS9 214 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 MYH15Q9Y2K3 1946 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 RRN3P2A6NIE6 340 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 OATP04181 439 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 TECP42680 631 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 PSMC5P62195 406 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 BFSP2Q13515 415 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 EPHA7Q15375 998 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 SERINC5Q86VE9 423 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 C4orf32Q8N8J7 132 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 BBXQ8WY36 941 aaPredicted RBP13.3□□□□□ -0.28
HPS4-214ENST00000485842 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
HPS4-214ENST00000485842 LXNQ9BS40 222 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 WNT8AQ9H1J5 351 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
HPS4-214ENST00000485842 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
HPS4-214ENST00000485842 TMEM150BA6NC51 233 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 LAD1O00515 517 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 CTSHP09668 335 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 QARSP47897 775 aaKnown RBP13.29□□□□□ -0.28
HPS4-214ENST00000485842 ADAM17P78536 824 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 ATP2C1P98194 919 aaPredicted RBP13.29□□□□□ -0.28
HPS4-214ENST00000485842 FPGSQ05932 587 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 CTTNQ14247 550 aaKnown RBP13.29□□□□□ -0.28
HPS4-214ENST00000485842 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 ZNF484Q5JVG2 852 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 MFSD5Q6N075 450 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 RUFY4Q6ZNE9 571 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 TMEM199Q8N511 208 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 RETREG2Q8NC44 543 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 SCLYQ96I15 445 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 FTOQ9C0B1 505 aaKnown RBP eCLIP13.29□□□□□ -0.28
HPS4-214ENST00000485842 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
HPS4-214ENST00000485842 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
HPS4-214ENST00000485842 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 COL1A2P08123 1366 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
HPS4-214ENST00000485842 DDX11L8A8MPP1 907 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
HPS4-214ENST00000485842 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 ZSCAN22P10073 491 aaPredicted RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 CSF2RAP15509 400 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 THPOP40225 353 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 PRPHP41219 470 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
HPS4-214ENST00000485842 CEBPZQ03701 1054 aaKnown RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 PKP1Q13835 747 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 SF3A1Q15459 793 aaKnown RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 TRIM71Q2Q1W2 868 aaKnown RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 MTERF2Q49AM1 385 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 MARCH8Q5T0T0 291 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 PLA2G4FQ68DD2 849 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 MTHFD1LQ6UB35 978 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 GDF15Q99988 308 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
HPS4-214ENST00000485842 UBE2OQ9C0C9 1292 aaKnown RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 WRAP73Q9P2S5 460 aaPredicted RBP13.28□□□□□ -0.28
HPS4-214ENST00000485842 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
HPS4-214ENST00000485842 MBLAC1A4D2B0 266 aaPredicted RBP13.27□□□□□ -0.29
HPS4-214ENST00000485842 VWA3AA6NCI4 1184 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 ZBTB42B2RXF5 422 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 BMP15O95972 392 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 F13A1P00488 732 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 CKBP12277 381 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 PDIA4P13667 645 aaKnown RBP13.27□□□□□ -0.29
HPS4-214ENST00000485842 SELPP16109 830 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 KLRC1P26715 233 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 RBL2Q08999 1139 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 PPIGQ13427 754 aaKnown RBP eCLIP13.27□□□□□ -0.291e-8■■■□□ 15.2
HPS4-214ENST00000485842 ZNF618Q5T7W0 954 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 TAF2Q6P1X5 1199 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 LRRC8DQ7L1W4 858 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 DNAJB3Q8WWF6 145 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 RAB34Q9BZG1 259 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 ZSWIM4Q9H7M6 989 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 LRWD1Q9UFC0 647 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 CEP131Q9UPN4 1083 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 CLIC4Q9Y696 253 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 EVPLQ92817 2033 aa13.27□□□□□ -0.29
HPS4-214ENST00000485842 PP2D1A8MPX8 630 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 MED24O75448 989 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 SLITRK3O94933 977 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 STBD1O95210 358 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 C22orf31O95567 290 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 IQCF3P0C7M6 154 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 ACRP10323 421 aa13.26□□□□□ -0.29
HPS4-214ENST00000485842 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
HPS4-214ENST00000485842 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
HPS4-214ENST00000485842 EPHB4P54760 987 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms