RNA–Protein interactions for RNA: ENST00000485535.5

PLXNB1-218, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,264 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-218ENST00000485535 ECM1Q16610 540 aa13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 KCTD19Q17RG1 926 aaPredicted RBP13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 PPP4R3AQ6IN85 833 aa13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 DPP8Q6V1X1 898 aaPredicted RBP13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 CLEC10AQ8IUN9 316 aa13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 PSTPIP2Q9H939 334 aa13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 AMACRQ9UHK6 382 aa13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
PLXNB1-218ENST00000485535 MYH1P12882 1939 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 ROBO3Q96MS0 1386 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 DAPK3O43293 454 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 AFPP02771 609 aaKnown RBP13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 TMOD1P28289 359 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 LRIG3Q6UXM1 1119 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 SLF2Q8IX21 1173 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 PRPF38AQ8NAV1 312 aaKnown RBP13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 GIMAP7Q8NHV1 300 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 PIK3R5Q8WYR1 880 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 CYFIP2Q96F07 1278 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 LEMD3Q9Y2U8 911 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 FSBPO95073 299 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 SERPINB2P05120 415 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 CACNA2D3Q8IZS8 1091 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
PLXNB1-218ENST00000485535 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.53□□□□□ -0.242e-7■■□□□ 14.5
PLXNB1-218ENST00000485535 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.53□□□□□ -0.245e-11■□□□□ 10.8
PLXNB1-218ENST00000485535 UFL1O94874 794 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 DHX9Q08211 1270 aaKnown RBP13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 BIRC3Q13489 604 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 KCNV1Q6PIU1 500 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 ZNF571Q7Z3V5 609 aaPredicted RBP13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 ADAT2Q7Z6V5 191 aaKnown RBP13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 TLDC2A0PJX2 215 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 CCDC188H7C350 402 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 CLSTN1O94985 981 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 UCHL3P15374 230 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 CEP57Q86XR8 500 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 SYCE1Q8N0S2 351 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 METTL13Q8N6R0 699 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.243e-8■■■■■ 37.6
PLXNB1-218ENST00000485535 RTFDC1Q9BY42 306 aaPredicted RBP13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 NAGPAQ9UK23 515 aa13.52□□□□□ -0.24
PLXNB1-218ENST00000485535 SMIM23A6NLE4 172 aa13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 GCFC2P16383 781 aaKnown RBP13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 PPP2R2AP63151 447 aa13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 SF3A3Q12874 501 aaKnown RBP eCLIP13.52□□□□□ -0.256e-7■■■■□ 21.7
PLXNB1-218ENST00000485535 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 AMFRQ9UKV5 643 aa13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 COL24A1Q17RW2 1714 aa13.52□□□□□ -0.25
PLXNB1-218ENST00000485535 LOC102724159A0A0B4J2E5 919 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 MEIS1O00470 390 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 STAT3P40763 770 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 MAGOHP61326 146 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 PWP2Q15269 919 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 ERMNQ8TAM6 284 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 MAGOHBQ96A72 148 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 SELENOSQ9BQE4 189 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 GANQ9H2C0 597 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 ATP8A1Q9Y2Q0 1164 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 LAMB1P07942 1786 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 POTEFA5A3E0 1075 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 TTI1O43156 1089 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 CALUO43852 315 aaPredicted RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 TBCAO75347 108 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 POTEIP0CG38 1075 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 TTBK2Q6IQ55 1244 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 POTEEQ6S8J3 1075 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 CCDC13Q8IYE1 715 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 ADGRF4Q8IZF3 695 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 RPGRQ92834 1020 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 SCLT1Q96NL6 688 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 KLC4Q9NSK0 619 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 PPP1R12BO60237 982 aaPredicted RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 ABCB4P21439 1286 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 RPL13P26373 211 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 DDR1Q08345 913 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 ZNF844Q08AG5 666 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 GKAP1Q5VSY0 366 aaPredicted RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 MSL1Q68DK7 614 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 PRR5LQ6MZQ0 368 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 KCTD1Q719H9 257 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 ACTRT1Q8TDG2 376 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 HAS1Q92839 578 aa13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 CALR3Q96L12 384 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 NAP1L4Q99733 375 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 GEMIN8Q9NWZ8 242 aaKnown RBP13.51□□□□□ -0.25
PLXNB1-218ENST00000485535 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms