RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 THPOP40225 353 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 ZNF75DP51815 510 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 RBL2Q08999 1139 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 TRIM71Q2Q1W2 868 aaKnown RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 ZNF618Q5T7W0 954 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 JAKMIP3Q5VZ66 844 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 CCDC186Q7Z3E2 898 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 KRT222Q8N1A0 295 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 ZNF397Q8NF99 534 aaPredicted RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 CYP2W1Q8TAV3 490 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 PHKBQ93100 1093 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 MXRA8Q9BRK3 442 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 AGXT2Q9BYV1 514 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 RNPEPQ9H4A4 650 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 KCND1Q9NSA2 647 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 SETD4Q9NVD3 440 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 YBX2Q9Y2T7 364 aaKnown RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 NID2Q14112 1375 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 MAFGO15525 162 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 TREHO43280 583 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 MYOGP15173 224 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 ZNF76P36508 570 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 GPNMBQ14956 572 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 SARM1Q6SZW1 724 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 SERINC5Q86VE9 423 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 SLC26A6Q9BXS9 759 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 TNMDQ9H2S6 317 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 SLC28A3Q9HAS3 691 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 NCOA5Q9HCD5 579 aaKnown RBP12.07□□□□□ -0.48
DDX56-212ENST00000485367 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
DDX56-212ENST00000485367 GSTTP1A0A1W2PQM5 241 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 NBNO60934 754 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 PARNO95453 639 aaKnown RBP12.06□□□□□ -0.48
DDX56-212ENST00000485367 GNAT1P11488 350 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 AP3B2Q13367 1082 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 TOB2Q14106 344 aaPredicted RBP12.06□□□□□ -0.48
DDX56-212ENST00000485367 ANKRD1Q15327 319 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 PKN1Q16512 942 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 MAFAQ8NHW3 353 aaPredicted RBP12.06□□□□□ -0.48
DDX56-212ENST00000485367 KIF18AQ8NI77 898 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
DDX56-212ENST00000485367 SEPT1Q8WYJ6 367 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
DDX56-212ENST00000485367 CBX8Q9HC52 389 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 C6orf50Q9HD87 102 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 FAM53CQ9NYF3 392 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 PCDHA11Q9Y5I1 949 aa12.06□□□□□ -0.48
DDX56-212ENST00000485367 RSPH10B2B2RC85 870 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 RBAK-RBAKDNI3L0D1 243 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 BAIAP3O94812 1187 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 SLFN14P0C7P3 912 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 RSPH10BP0C881 870 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 ARP10275 920 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 MARK3P27448 753 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 HOXC8P31273 242 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 SREBF1P36956 1147 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 KCNJ6P48051 423 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 CLK2P49760 499 aaKnown RBP12.05□□□□□ -0.48
DDX56-212ENST00000485367 EVCP57679 992 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 ARHGAP4P98171 946 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 CEP55Q53EZ4 464 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 TRAF7Q6Q0C0 670 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 CCDC83Q8IWF9 413 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 DRC7Q8IY82 874 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 GLG1Q92896 1179 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 SLC9A7Q96T83 725 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 TRIM5Q9C035 493 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 TSPYL1Q9H0U9 437 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 CLSTN2Q9H4D0 955 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 PRDM12Q9H4Q4 367 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
DDX56-212ENST00000485367 CHD9Q3L8U1 2897 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 ESYT2A0FGR8 921 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 GOLGA6L4A6NEF3 574 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 ADAMTS3O15072 1205 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 CXCL10P02778 98 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 TUBB4AP04350 444 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 IFNAR1P17181 557 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 DHX8Q14562 1220 aaKnown RBP12.05□□□□□ -0.48
DDX56-212ENST00000485367 MBTPS1Q14703 1052 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 NTRK3Q16288 839 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 TPD52L1Q16890 204 aaPredicted RBP12.05□□□□□ -0.48
DDX56-212ENST00000485367 CEP135Q66GS9 1140 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 PPP2R2DQ66LE6 453 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 HERC6Q8IVU3 1022 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 REXO1Q8N1G1 1221 aaKnown RBP12.05□□□□□ -0.48
DDX56-212ENST00000485367 PHOSPHO2Q8TCD6 241 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 LMBR1Q8WVP7 490 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 MRFAP1L1Q96HT8 127 aa12.05□□□□□ -0.48
DDX56-212ENST00000485367 C16orf45Q96MC5 204 aaPredicted RBP12.05□□□□□ -0.48
DDX56-212ENST00000485367 RNF26Q9BY78 433 aaPredicted RBP12.05□□□□□ -0.48
DDX56-212ENST00000485367 ZMYND12Q9H0C1 365 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms