RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 FAM89AQ96GI7 184 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 WNK4Q96J92 1243 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 SRPK1Q96SB4 655 aaKnown RBP5.3□□□□□ -1.56
VPS50-217ENST00000485140 CD244Q9BZW8 370 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 ZDHHC5Q9C0B5 715 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 CD248Q9HCU0 757 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 AURKAIP1Q9NWT8 199 aaPredicted RBP5.3□□□□□ -1.56
VPS50-217ENST00000485140 PODXL2Q9NZ53 605 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 SFMBT1Q9UHJ3 866 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 WASF3Q9UPY6 502 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 TELO2Q9Y4R8 837 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 PCDHA8Q9Y5H6 950 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 ASXL2Q76L83 1435 aa5.3□□□□□ -1.56
VPS50-217ENST00000485140 CYR61O00622 381 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 MAN2B1O00754 1011 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 MATN3O15232 486 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 GPR42O15529 346 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 CRTAMO95727 393 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 HMGCRP04035 888 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 PYGMP11217 842 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 MEOX1P50221 254 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 PRKD1Q15139 912 aaPredicted RBP5.29□□□□□ -1.56
VPS50-217ENST00000485140 POLNQ7Z5Q5 900 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 SH3RF2Q8TEC5 729 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 EDAQ92838 391 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 TACO1Q9BSH4 297 aaKnown RBP5.29□□□□□ -1.56
VPS50-217ENST00000485140 MEGF9Q9H1U4 602 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 NELFAQ9H3P2 528 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 SNTG2Q9NY99 539 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 VWA7Q9Y334 891 aa5.29□□□□□ -1.56
VPS50-217ENST00000485140 SLC12A8A0AV02 714 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 FZD7O75084 574 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 RAD17O75943 681 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 FAM153BP0C7A2 387 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 KRT15P19012 456 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 TACR2P21452 398 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 SDHAP31040 664 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 FLT3P36888 993 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 ICAM4Q14773 271 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 EIF4HQ15056 248 aaKnown RBP5.28□□□□□ -1.56
VPS50-217ENST00000485140 DDX53Q86TM3 631 aaKnown RBP5.28□□□□□ -1.56
VPS50-217ENST00000485140 OSTM1Q86WC4 334 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 NME9Q86XW9 330 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 PTRH1Q86Y79 214 aaKnown RBP5.28□□□□□ -1.56
VPS50-217ENST00000485140 SYNPOQ8N3V7 929 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 NEIL1Q96FI4 390 aaPredicted RBP5.28□□□□□ -1.56
VPS50-217ENST00000485140 EXOC2Q96KP1 924 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 RBPJLQ9UBG7 517 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 NDOR1Q9UHB4 597 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 ST6GALNAC2Q9UJ37 374 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 SLC30A1Q9Y6M5 507 aa5.28□□□□□ -1.56
VPS50-217ENST00000485140 A0A0G2JNJ9 132 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 ESYT3A0FGR9 886 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 FAM90A27PA6NNH2 459 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 ARHGAP6O43182 974 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 DIAPH1O60610 1272 aaKnown RBP5.27□□□□□ -1.57
VPS50-217ENST00000485140 IL18BPO95998 194 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 C4BPAP04003 597 aaKnown RBP5.27□□□□□ -1.57
VPS50-217ENST00000485140 AMY2AP04746 511 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 SRGAP2CP0DJJ0 459 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 AMY2BP19961 511 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 CR2P20023 1033 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 COMTP21964 271 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 ECE1P42892 770 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 FNTBP49356 437 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 DNM2P50570 870 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 HHEXQ03014 270 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 C2orf27AQ580R0 203 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 OTOP2Q7RTS6 562 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 RBM12BQ8IXT5 1001 aaKnown RBP5.27□□□□□ -1.57
VPS50-217ENST00000485140 SH3RF3Q8TEJ3 882 aaPredicted RBP5.27□□□□□ -1.57
VPS50-217ENST00000485140 OR10A5Q9H207 317 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 SLC39A2Q9NP94 309 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 Q9UFV3 132 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 PUF60Q9UHX1 559 aaKnown RBP5.27□□□□□ -1.57
VPS50-217ENST00000485140 OAZ3Q9UMX2 235 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
VPS50-217ENST00000485140 NR2E1Q9Y466 385 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 PCDHA9Q9Y5H5 950 aa5.27□□□□□ -1.57
VPS50-217ENST00000485140 TCRBV5S4A2TA0A5A2 114 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 PLD2O14939 933 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 FOXP2O15409 715 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 CYP27B1O15528 508 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 JAM2P57087 298 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 PURAQ00577 322 aaKnown RBP5.26□□□□□ -1.57
VPS50-217ENST00000485140 GRAMD4Q6IC98 578 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 RTKN2Q8IZC4 609 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 Q8TCH9 128 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 BOCQ9BWV1 1114 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 OR10A2Q9H208 303 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 SMURF1Q9HCE7 757 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 CBLCQ9ULV8 474 aa5.26□□□□□ -1.57
VPS50-217ENST00000485140 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.25□□□□□ -1.57
VPS50-217ENST00000485140 APEX1P27695 318 aaKnown RBP5.25□□□□□ -1.57
VPS50-217ENST00000485140 FNDC3BQ53EP0 1204 aaKnown RBP5.25□□□□□ -1.57
VPS50-217ENST00000485140 FOXB2Q5VYV0 432 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 TMEM200BQ69YZ2 307 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 TCTN3Q6NUS6 607 aa5.25□□□□□ -1.57
VPS50-217ENST00000485140 CC2D1AQ6P1N0 951 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms