RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 LRG1P02750 347 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 AMY2AP04746 511 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 AMY2BP19961 511 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 GJA4P35212 333 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 MCTP2Q6DN12 878 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 BOCQ9BWV1 1114 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 SMURF1Q9HCE7 757 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 PCDH12Q9NPG4 1184 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 SRPK3Q9UPE1 567 aa9.23□□□□□ -0.93
UBR3-210ENST00000484596 TCRBV5S4A2TA0A5A2 114 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 PTPDC1A2A3K4 754 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 SLC27A2O14975 620 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 CLASP2O75122 1294 aaKnown RBP9.22□□□□□ -0.93
UBR3-210ENST00000484596 EPHA5P54756 1037 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 KRTAP10-2P60368 255 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 OCRLQ01968 901 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 FAM26FQ5R3K3 315 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 PTRH1Q86Y79 214 aaKnown RBP9.22□□□□□ -0.93
UBR3-210ENST00000484596 UBR7Q8N806 425 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 TXNDC5Q8NBS9 432 aaKnown RBP9.22□□□□□ -0.93
UBR3-210ENST00000484596 USP7Q93009 1102 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 MCM8Q9UJA3 840 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 ATP23Q9Y6H3 246 aa9.22□□□□□ -0.93
UBR3-210ENST00000484596 hCG_2014768A0A024R1R8 64 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 HIP1RO75146 1068 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.21□□□□□ -0.94
UBR3-210ENST00000484596 AFAP1L2Q8N4X5 818 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 TTLL11Q8NHH1 800 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 SH3RF2Q8TEC5 729 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 SCYL1Q96KG9 808 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 ZSWIM3Q96MP5 696 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 WASF3Q9UPY6 502 aa9.21□□□□□ -0.94
UBR3-210ENST00000484596 MAN2B1O00754 1011 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 ZEB2O60315 1214 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 BRINP1O60477 761 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 ANAPC15P60006 121 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 IGBP1P78318 339 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 AMPD3Q01432 767 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 DSG1Q02413 1049 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 KIAA2012Q0VF49 1180 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 EFEMP1Q12805 493 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 TUSC3Q13454 348 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 SEPT7Q16181 437 aaKnown RBP9.2□□□□□ -0.94
UBR3-210ENST00000484596 TTC1Q99614 292 aa9.2□□□□□ -0.94
UBR3-210ENST00000484596 MROH6A6NGR9 719 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 H7C1D1 291 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 IRF9Q00978 393 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 ZNF174Q15697 407 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 PRAMEF18Q5VWM3 479 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 NXPE1Q8N323 547 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 CLEC4DQ8WXI8 215 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 GPATCH3Q96I76 525 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 IFT22Q9H7X7 185 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 ATP8A1Q9Y2Q0 1164 aa9.19□□□□□ -0.94
UBR3-210ENST00000484596 K7ESM1 405 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 ZNF28P17035 718 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 IL13P35225 146 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 IL2P60568 153 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 STRN3Q13033 797 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 C11orf74Q86VG3 221 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 NOSTRINQ8IVI9 506 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 RBM12BQ8IXT5 1001 aaKnown RBP9.18□□□□□ -0.94
UBR3-210ENST00000484596 CLIC6Q96NY7 704 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 CD244Q9BZW8 370 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 RBPJLQ9UBG7 517 aa9.18□□□□□ -0.94
UBR3-210ENST00000484596 KPNA1P52294 538 aaPredicted RBP9.17□□□□□ -0.94
UBR3-210ENST00000484596 MLLT6P55198 1093 aaPredicted RBP9.17□□□□□ -0.94
UBR3-210ENST00000484596 GRIN1Q05586 938 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 SPATS1Q496A3 300 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 BTBD8Q5XKL5 378 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 TMC5Q6UXY8 1006 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 PASD1Q8IV76 773 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 SMC1BQ8NDV3 1235 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 ATL2Q8NHH9 583 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 TMEM209Q96SK2 561 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 KCNH7Q9NS40 1196 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 HSPBP1Q9NZL4 362 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 CROTQ9UKG9 612 aa9.17□□□□□ -0.94
UBR3-210ENST00000484596 CNOT11Q9UKZ1 510 aaKnown RBP9.17□□□□□ -0.94
UBR3-210ENST00000484596 ZNF891A8MT65 544 aaPredicted RBP9.16□□□□□ -0.94
UBR3-210ENST00000484596 SCDO00767 359 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 ITGB3P05106 788 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 ADRB1P08588 477 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 ZBTB48P10074 688 aaPredicted RBP9.16□□□□□ -0.94
UBR3-210ENST00000484596 BPIP17213 487 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 PTPN1P18031 435 aaKnown RBP9.16□□□□□ -0.94
UBR3-210ENST00000484596 LSSP48449 732 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 STRA8Q7Z7C7 330 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 FAM124AQ86V42 546 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.94
UBR3-210ENST00000484596 PCIF1Q9H4Z3 704 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 ACSS2Q9NR19 701 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 RIC8BQ9NVN3 520 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 APOBEC2Q9Y235 224 aaKnown RBP9.16□□□□□ -0.94
UBR3-210ENST00000484596 INVSQ9Y283 1065 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 B3GALT1Q9Y5Z6 326 aa9.16□□□□□ -0.94
UBR3-210ENST00000484596 KCNK3O14649 394 aa9.15□□□□□ -0.94
UBR3-210ENST00000484596 KRT37O76014 449 aa9.15□□□□□ -0.94
UBR3-210ENST00000484596 FKBP9O95302 570 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms