RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CHRNA1P02708 482 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 CA3P07451 260 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 PSAPP07602 524 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 FOSL2P15408 326 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 ATP4AP20648 1035 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 NR5A1Q13285 461 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 IKBKEQ14164 716 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 Q4G0T1 1027 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
MSH5-216ENST00000484309 HERC6Q8IVU3 1022 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 FAM177A1Q8N128 213 aaPredicted RBP13.89□□□□□ -0.19
MSH5-216ENST00000484309 ATP8B4Q8TF62 1192 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 TEKT3Q9BXF9 490 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 UNC45AQ9H3U1 944 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 DDX25Q9UHL0 483 aaKnown RBP13.89□□□□□ -0.19
MSH5-216ENST00000484309 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 PCDHA11Q9Y5I1 949 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 PCDHA10Q9Y5I2 948 aa13.89□□□□□ -0.19
MSH5-216ENST00000484309 CHD9Q3L8U1 2897 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 ARHGEF15O94989 841 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 GHRP10912 638 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 KRT2P35908 639 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 GUCY1B3Q02153 619 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 MGAT3Q09327 533 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 UGCGQ16739 394 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 PLEKHG4Q58EX7 1191 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 FAM26DQ5JW98 314 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 RSPH3Q86UC2 560 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 SMAP1Q8IYB5 467 aaPredicted RBP13.88□□□□□ -0.19
MSH5-216ENST00000484309 SEPT8Q92599 483 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 CERS4Q9HA82 394 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 CDY2AQ9Y6F7 541 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 CDH23Q9H251 3354 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 IGSF9BQ9UPX0 1349 aa13.88□□□□□ -0.19
MSH5-216ENST00000484309 CYP3A7-CYP3A51PA0A087WV96 503 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 ABHD14A-ACY1A0A1B0GW23 586 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 LCHNA4D1U4 455 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 TLL1O43897 1013 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 HBP1O60381 514 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 CCNT1O60563 726 aaKnown RBP13.87□□□□□ -0.19
MSH5-216ENST00000484309 PSMD10O75832 226 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 CYP3A7P24462 503 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 KLRC1P26715 233 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
MSH5-216ENST00000484309 SLC26A2P50443 739 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 MRPS6P82932 125 aaKnown RBP13.87□□□□□ -0.19
MSH5-216ENST00000484309 KRT40Q6A162 431 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 MTHFD1LQ6UB35 978 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 MIER3Q7Z3K6 550 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 SPRED2Q7Z698 418 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 MYOCDQ8IZQ8 938 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 ETNPPLQ8TBG4 499 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 PHOSPHO2Q8TCD6 241 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 TNPO1Q92973 898 aaKnown RBP13.87□□□□□ -0.19
MSH5-216ENST00000484309 MBOAT7Q96N66 472 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 PPP1R16BQ96T49 567 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 RIT2Q99578 217 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 ZBED2Q9BTP6 218 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 BRMS1Q9HCU9 246 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 MAFBQ9Y5Q3 323 aaPredicted RBP13.87□□□□□ -0.19
MSH5-216ENST00000484309 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
MSH5-216ENST00000484309 COL1A2P08123 1366 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 ZBTB42B2RXF5 422 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 BTBD18B2RXH4 712 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 ZNF862O60290 1169 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 MMP1P03956 469 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 JAK3P52333 1124 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 PRKCEQ02156 737 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 TRIM29Q14134 588 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 LPIN1Q14693 890 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 ZNF484Q5JVG2 852 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 MOXD1Q6UVY6 613 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 RPAINQ86UA6 219 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 DIS3L2Q8IYB7 885 aaKnown RBP13.86□□□□□ -0.19
MSH5-216ENST00000484309 BBXQ8WY36 941 aaPredicted RBP13.86□□□□□ -0.19
MSH5-216ENST00000484309 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 IFIH1Q9BYX4 1025 aaKnown RBP13.86□□□□□ -0.19
MSH5-216ENST00000484309 PCDHA2Q9Y5H9 948 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 TRPV2Q9Y5S1 764 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 COL6A3P12111 3177 aa13.86□□□□□ -0.19
MSH5-216ENST00000484309 TTC3P53804 2025 aa13.85□□□□□ -0.19
MSH5-216ENST00000484309 KIF28PB7ZC32 967 aa13.85□□□□□ -0.19
MSH5-216ENST00000484309 EFCAB14O75071 495 aa13.85□□□□□ -0.19
MSH5-216ENST00000484309 UPP2O95045 317 aa13.85□□□□□ -0.19
MSH5-216ENST00000484309 AMHP03971 560 aa13.85□□□□□ -0.19
MSH5-216ENST00000484309 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
MSH5-216ENST00000484309 FBXO47Q5MNV8 452 aa13.85□□□□□ -0.19
MSH5-216ENST00000484309 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
MSH5-216ENST00000484309 ZSCAN31Q96LW9 406 aaPredicted RBP13.85□□□□□ -0.19
MSH5-216ENST00000484309 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
MSH5-216ENST00000484309 GINS2Q9Y248 185 aa13.85□□□□□ -0.19
MSH5-216ENST00000484309 RALGAPA2Q2PPJ7 1873 aa13.84□□□□□ -0.19
MSH5-216ENST00000484309 PRRC2BQ5JSZ5 2229 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms