RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ETV4P43268 484 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 DUSP8Q13202 625 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 TBR1Q16650 682 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 TM4SF20Q53R12 229 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 Q6ZSN1 163 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 ADOQ96SZ5 270 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 DPYSL5Q9BPU6 564 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 ZDHHC5Q9C0B5 715 aa6.94□□□□□ -1.3
SCAF11-207ENST00000484275 CCDC66A2RUB6 948 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 CYR61O00622 381 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 FZD7O75084 574 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 RAC3P60763 192 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 ZC3H6P61129 1189 aaKnown RBP6.93□□□□□ -1.3
SCAF11-207ENST00000484275 GABREP78334 506 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 WDR72Q3MJ13 1102 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 AGBL4Q5VU57 503 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 DPP8Q6V1X1 898 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-207ENST00000484275 LARP4Q71RC2 724 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCAF11-207ENST00000484275 DHRS4Q9BTZ2 278 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 AMNQ9BXJ7 453 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 KIAA1683Q9H0B3 1180 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 INCENPQ9NQS7 918 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 GALNT8Q9NY28 637 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 OAZ3Q9UMX2 235 aa6.93□□□□□ -1.3
SCAF11-207ENST00000484275 MRPS23Q9Y3D9 190 aaKnown RBP6.93□□□□□ -1.3
SCAF11-207ENST00000484275 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 PLSCR1O15162 318 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
SCAF11-207ENST00000484275 GJA4P35212 333 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 DNM2P50570 870 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 ST5P78524 1137 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 PRKD1Q15139 912 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-207ENST00000484275 STILQ15468 1287 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 CRY1Q16526 586 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 LRSAM1Q6UWE0 723 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 CFHR4Q92496 578 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 WNK4Q96J92 1243 aa6.92□□□□□ -1.3
SCAF11-207ENST00000484275 FAM221BA6H8Z2 402 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 SUV39H1O43463 412 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 RAD17O75943 681 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 CR2P20023 1033 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 COMTP21964 271 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 KCNQ1P51787 676 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 HMGA2P52926 109 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 LACTBP83111 547 aaPredicted RBP6.91□□□□□ -1.3
SCAF11-207ENST00000484275 KLF10Q13118 480 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 RASA3Q14644 834 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 ZNF568Q3ZCX4 644 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 CISD2Q8N5K1 135 aaKnown RBP6.91□□□□□ -1.3
SCAF11-207ENST00000484275 EDAQ92838 391 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 MRIQ9BWK5 157 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 PCED1AQ9H1Q7 454 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 SLC52A2Q9HAB3 445 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 CDC42EP3Q9UKI2 254 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 HS3ST3A1Q9Y663 406 aa6.91□□□□□ -1.3
SCAF11-207ENST00000484275 HMGCRP04035 888 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 HERVK_113P62684 666 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 SERINC3Q13530 473 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 NFYCQ13952 458 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 EIF4HQ15056 248 aaKnown RBP6.9□□□□□ -1.3
SCAF11-207ENST00000484275 HS1BP3Q53T59 392 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 NBPF6Q5VWK0 638 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 KANK2Q63ZY3 851 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 NOSTRINQ8IVI9 506 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 ZC3H7AQ8IWR0 971 aaKnown RBP6.9□□□□□ -1.3
SCAF11-207ENST00000484275 NBPF4Q96M43 638 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 IPO9Q96P70 1041 aaKnown RBP6.9□□□□□ -1.3
SCAF11-207ENST00000484275 UCKL1Q9NWZ5 548 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 SIRPGQ9P1W8 387 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 ING1Q9UK53 422 aaPredicted RBP6.9□□□□□ -1.3
SCAF11-207ENST00000484275 NR2E1Q9Y466 385 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 KDM2BQ8NHM5 1336 aa6.9□□□□□ -1.3
SCAF11-207ENST00000484275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-207ENST00000484275 CDC14BO60729 498 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 MMEP08473 750 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 CD83Q01151 205 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 FOXE3Q13461 319 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 ZMAT1Q5H9K5 638 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 RNF207Q6ZRF8 634 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 CXXC5Q7LFL8 322 aaKnown RBP6.89□□□□□ -1.31
SCAF11-207ENST00000484275 GSTCDQ8NEC7 633 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 EXTL1Q92935 676 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 SCYL1Q96KG9 808 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 BTBD2Q9BX70 525 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 PLA2G12BQ9BX93 195 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 TANGO6Q9C0B7 1094 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 PPP1R1BQ9UD71 204 aaPredicted RBP6.89□□□□□ -1.31
SCAF11-207ENST00000484275 COQ6Q9Y2Z9 468 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 SLC30A1Q9Y6M5 507 aa6.89□□□□□ -1.31
SCAF11-207ENST00000484275 RASSF10A6NK89 507 aa6.88□□□□□ -1.31
SCAF11-207ENST00000484275 NPIPB8E9PQR5 432 aa6.88□□□□□ -1.31
SCAF11-207ENST00000484275 ARHGAP6O43182 974 aa6.88□□□□□ -1.31
SCAF11-207ENST00000484275 RASGRP1O95267 797 aa6.88□□□□□ -1.31
SCAF11-207ENST00000484275 ATP2B1P20020 1258 aa6.88□□□□□ -1.31
SCAF11-207ENST00000484275 ACO1P21399 889 aaKnown RBP6.88□□□□□ -1.31
SCAF11-207ENST00000484275 LONRF2Q1L5Z9 754 aa6.88□□□□□ -1.31
SCAF11-207ENST00000484275 USP39Q53GS9 565 aaKnown RBP6.88□□□□□ -1.31
SCAF11-207ENST00000484275 FAM47CQ5HY64 1035 aa6.88□□□□□ -1.31
SCAF11-207ENST00000484275 MIIPQ5JXC2 388 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms