RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 CHRNA1P02708 482 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 RB1P06400 928 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 ICAM3P32942 547 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 GTF2F1P35269 517 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPSF4-213ENST00000484112 IRS1P35568 1242 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 BMPR1AP36894 532 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 LTBRP36941 435 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 CCT2P78371 535 aaKnown RBP11.39□□□□□ -0.59
CPSF4-213ENST00000484112 NHLH1Q02575 133 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 DLX2Q07687 328 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-213ENST00000484112 HYAL1Q12794 435 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 SEMA3FQ13275 785 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 RABEP1Q15276 862 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 PKN1Q16512 942 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 FAM26DQ5JW98 314 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 USP17L6PQ6QN14 398 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 LMBR1Q8WVP7 490 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 WASF1Q92558 559 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 C11orf84Q9BUA3 381 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-213ENST00000484112 SLC26A6Q9BXS9 759 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 MUTYHQ9UIF7 546 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 TPCN1Q9ULQ1 816 aa11.39□□□□□ -0.59
CPSF4-213ENST00000484112 hCG_1642624A0A1W2PR95 340 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 ENPP3O14638 875 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 MBTPS2O43462 519 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 XBP1P17861 261 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 CLK2P49760 499 aaKnown RBP11.38□□□□□ -0.59
CPSF4-213ENST00000484112 SCRN1Q12765 414 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-213ENST00000484112 RUFY4Q6ZNE9 571 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 HFE2Q6ZVN8 426 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 NLRX1Q86UT6 975 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 GIMAP8Q8ND71 665 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-213ENST00000484112 PHKBQ93100 1093 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-213ENST00000484112 INPP4AQ96PE3 977 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-213ENST00000484112 LMAN2LQ9H0V9 348 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 ALG13Q9NP73 1137 aaKnown RBP11.38□□□□□ -0.59
CPSF4-213ENST00000484112 LIMCH1Q9UPQ0 1083 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
CPSF4-213ENST00000484112 ADGRA3Q8IWK6 1321 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 NRCAMQ92823 1304 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 LINC01565O15544 149 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 ST18O60284 1047 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 MARK3P27448 753 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 TCF7P36402 384 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-213ENST00000484112 NDUFV1P49821 464 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 ADAM17P78536 824 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 PPFIA1Q13136 1202 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 LPIN1Q14693 890 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 SMAD2Q15796 467 aaKnown RBP11.37□□□□□ -0.59
CPSF4-213ENST00000484112 CTC1Q2NKJ3 1217 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 TYW1BQ6NUM6 668 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 RSPH3Q86UC2 560 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 RNF135Q8IUD6 432 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 DNAJB3Q8WWF6 145 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 GTF3C6Q969F1 213 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 GPRASP2Q96D09 838 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 MFSD14AQ96MC6 490 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 POP1Q99575 1024 aaKnown RBP11.37□□□□□ -0.59
CPSF4-213ENST00000484112 KIF2CQ99661 725 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 SENP7Q9BQF6 1050 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 NCOA5Q9HCD5 579 aaKnown RBP11.37□□□□□ -0.59
CPSF4-213ENST00000484112 SH2B1Q9NRF2 756 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-213ENST00000484112 PKD2L1Q9P0L9 805 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 CD207Q9UJ71 328 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 PCDHA6Q9UN73 950 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 PCDHA8Q9Y5H6 950 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 TRANK1O15050 2925 aa11.37□□□□□ -0.59
CPSF4-213ENST00000484112 TBX10O75333 385 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 LINC00271P0C7V0 271 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 IBSPP21815 317 aaPredicted RBP11.36□□□□□ -0.59
CPSF4-213ENST00000484112 SREBF1P36956 1147 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 MCM2P49736 904 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 IGBP1P78318 339 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 STK3Q13188 491 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 SMAD4Q13485 552 aaKnown RBP11.36□□□□□ -0.59
CPSF4-213ENST00000484112 TAF2Q6P1X5 1199 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 REXO1Q8N1G1 1221 aaKnown RBP11.36□□□□□ -0.59
CPSF4-213ENST00000484112 GLG1Q92896 1179 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 LLPHQ9BRT6 129 aaKnown RBP11.36□□□□□ -0.59
CPSF4-213ENST00000484112 KCNH6Q9H252 994 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 CDY2AQ9Y6F7 541 aa11.36□□□□□ -0.59
CPSF4-213ENST00000484112 MUC6Q6W4X9 2439 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 ATP9AO75110 1047 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 DGKIO75912 1065 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 MMP1P03956 469 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 CYP3A4P08684 503 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 MGAT3Q09327 533 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 ADAM15Q13444 863 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 GRIK4Q16099 956 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 ME3Q16798 604 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 PAN2Q504Q3 1202 aaKnown RBP11.35□□□□□ -0.59
CPSF4-213ENST00000484112 FBXO47Q5MNV8 452 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 NIPA1Q7RTP0 329 aa11.35□□□□□ -0.59
CPSF4-213ENST00000484112 RBM23Q86U06 439 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms