RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 LARP1BQ659C4 914 aaKnown RBP29.86■■■□□ 2.37
GTF3C4-202ENST00000483873 TRAF7Q6Q0C0 670 aa29.86■■■□□ 2.37
GTF3C4-202ENST00000483873 LRRC8DQ7L1W4 858 aa29.86■■■□□ 2.37
GTF3C4-202ENST00000483873 CKAP2LQ8IYA6 745 aa29.86■■■□□ 2.37
GTF3C4-202ENST00000483873 EVPLQ92817 2033 aa29.85■■■□□ 2.37
GTF3C4-202ENST00000483873 SELPP16109 830 aa29.85■■■□□ 2.37
GTF3C4-202ENST00000483873 THPOP40225 353 aa29.85■■■□□ 2.37
GTF3C4-202ENST00000483873 ZNF174Q15697 407 aa29.85■■■□□ 2.37
GTF3C4-202ENST00000483873 TMEM240Q5SV17 173 aa29.85■■■□□ 2.37
GTF3C4-202ENST00000483873 DEFB128Q7Z7B8 93 aa29.85■■■□□ 2.37
GTF3C4-202ENST00000483873 RDM1Q8NG50 284 aa29.85■■■□□ 2.37
GTF3C4-202ENST00000483873 MBLAC1A4D2B0 266 aaPredicted RBP29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 RRN3P2A6NIE6 340 aa29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 HBP1O60381 514 aa29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 BAG4O95429 457 aaKnown RBP29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 SPIRE1Q08AE8 756 aa29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 GPNMBQ14956 572 aa29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 TTC38Q5R3I4 469 aa29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 ZNF365Q70YC5 407 aa29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 SLFN12Q8IYM2 578 aa29.84■■■□□ 2.37
GTF3C4-202ENST00000483873 TOB1P50616 345 aaPredicted RBP29.83■■■□□ 2.37
GTF3C4-202ENST00000483873 MTMR9Q96QG7 549 aa29.83■■■□□ 2.37
GTF3C4-202ENST00000483873 ZBTB42B2RXF5 422 aa29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 CTSHP09668 335 aa29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 PRKCEQ02156 737 aa29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 NCAPH2Q6IBW4 605 aa29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 BANK1Q8NDB2 785 aa29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 BBXQ8WY36 941 aaPredicted RBP29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 TNPO1Q92973 898 aaKnown RBP29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 INTS4Q96HW7 963 aaKnown RBP29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 NOL7Q9UMY1 257 aaKnown RBP29.82■■■□□ 2.36
GTF3C4-202ENST00000483873 TXKP42681 527 aa29.81■■■□□ 2.36
GTF3C4-202ENST00000483873 TRAPPC10P48553 1259 aa29.81■■■□□ 2.36
GTF3C4-202ENST00000483873 MBTPS1Q14703 1052 aa29.81■■■□□ 2.36
GTF3C4-202ENST00000483873 PSRC1Q6PGN9 363 aaPredicted RBP29.81■■■□□ 2.36
GTF3C4-202ENST00000483873 HSCBQ8IWL3 235 aa29.81■■■□□ 2.36
GTF3C4-202ENST00000483873 RNPC3Q96LT9 517 aaKnown RBP29.81■■■□□ 2.36
GTF3C4-202ENST00000483873 LOXHD1Q8IVV2 1947 aa29.81■■■□□ 2.36
GTF3C4-202ENST00000483873 SOX1O00570 391 aaPredicted RBP29.8■■■□□ 2.36
GTF3C4-202ENST00000483873 OATP04181 439 aa29.8■■■□□ 2.36
GTF3C4-202ENST00000483873 RFC2P35250 354 aa29.8■■■□□ 2.36
GTF3C4-202ENST00000483873 RPUSD2Q8IZ73 545 aaKnown RBP29.8■■■□□ 2.36
GTF3C4-202ENST00000483873 TTC12Q9H892 705 aaPredicted RBP29.8■■■□□ 2.36
GTF3C4-202ENST00000483873 PCDHA12Q9UN75 941 aa29.8■■■□□ 2.36
GTF3C4-202ENST00000483873 COL1A2P08123 1366 aa29.8■■■□□ 2.36
GTF3C4-202ENST00000483873 NBNO60934 754 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 ZNF484Q5JVG2 852 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 TAF2Q6P1X5 1199 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 DNAJB3Q8WWF6 145 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 FAM167AQ96KS9 214 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 PCDHB6Q9Y5E3 794 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 RSPH10B2B2RC85 870 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 RSPH10BP0C881 870 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 KLRC1P26715 233 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 MTHFD1LQ6UB35 978 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 OTOP2Q7RTS6 562 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 OSBPL7Q9BZF2 842 aa29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 FAM49AQ9H0Q0 323 aaPredicted RBP29.79■■■□□ 2.36
GTF3C4-202ENST00000483873 TMEM150BA6NC51 233 aa29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 STBD1O95210 358 aa29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 FGBP02675 491 aa29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 ORC2Q13416 577 aaPredicted RBP29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 EPHA7Q15375 998 aa29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 LRIT3Q3SXY7 679 aa29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 WRAP73Q9P2S5 460 aaPredicted RBP29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 PCDHA2Q9Y5H9 948 aa29.78■■■□□ 2.36
GTF3C4-202ENST00000483873 ARID2Q68CP9 1835 aa29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 SZT2Q5T011 3432 aa29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 VPS37CA5D8V6 355 aaPredicted RBP29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 CAND2O75155 1236 aa29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 OR52Z1P0C646 297 aa29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 FTOQ9C0B1 505 aaKnown RBP eCLIP29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 RGL1Q9NZL6 768 aa29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 CXXC1Q9P0U4 656 aaPredicted RBP29.77■■■□□ 2.36
GTF3C4-202ENST00000483873 POTEMA6NI47 508 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 C22orf31O95567 290 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 PFKMP08237 780 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 PSMC5P62195 406 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 TCTN1Q2MV58 587 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 RPAINQ86UA6 219 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 C4orf32Q8N8J7 132 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 HERVK_113Q902F9 699 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 LRCH3Q96II8 777 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 DYDC2Q96IM9 177 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 NRBP2Q9NSY0 501 aa29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 SEPT9Q9UHD8 586 aaPredicted RBP29.76■■■□□ 2.35
GTF3C4-202ENST00000483873 GBF1Q92538 1859 aa29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 CXCL10P02778 98 aa29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 P4HBP07237 508 aaKnown RBP29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 QARSP47897 775 aaKnown RBP29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 CYP4A11Q02928 519 aa29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 RASIP1Q5U651 963 aa29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 SH2D3AQ9BRG2 576 aa29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 PTPRSQ13332 1948 aa29.75■■■□□ 2.35
GTF3C4-202ENST00000483873 SMIM35A0A1B0GVV1 85 aa29.74■■■□□ 2.35
GTF3C4-202ENST00000483873 PARNO95453 639 aaKnown RBP29.74■■■□□ 2.35
GTF3C4-202ENST00000483873 CHRNA1P02708 482 aa29.74■■■□□ 2.35
GTF3C4-202ENST00000483873 PDCP20941 246 aa29.74■■■□□ 2.35
GTF3C4-202ENST00000483873 SYT1P21579 422 aa29.74■■■□□ 2.35
GTF3C4-202ENST00000483873 MGAT3Q09327 533 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms