RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 LRRC37A2A6NM11 1700 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 LOC102724159A0A0B4J2E5 919 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 ARHGEF35A5YM69 484 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 LGALS16A8MUM7 142 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 TBCAO75347 108 aaKnown RBP15.55■□□□□ 0.08
CLK3-204ENST00000483723 CELF2O95319 508 aaKnown RBP15.55■□□□□ 0.08
CLK3-204ENST00000483723 ITGBL1O95965 494 aaPredicted RBP15.55■□□□□ 0.08
CLK3-204ENST00000483723 SKILP12757 684 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 SFPQP23246 707 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLK3-204ENST00000483723 HOXD13P35453 343 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 RARRES1P49788 294 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 ERVK-9P63128 1117 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 ERVK-24P63145 666 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 FKBP3Q00688 224 aaKnown RBP15.55■□□□□ 0.08
CLK3-204ENST00000483723 NOLC1Q14978 699 aaKnown RBP eCLIP15.55■□□□□ 0.08
CLK3-204ENST00000483723 PWP2Q15269 919 aaKnown RBP15.55■□□□□ 0.08
CLK3-204ENST00000483723 UGCGQ16739 394 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 PTPN21Q16825 1174 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 SPRYD7Q5W111 196 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 CNOT6LQ96LI5 555 aaKnown RBP15.55■□□□□ 0.08
CLK3-204ENST00000483723 FIZ1Q96SL8 496 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 TUBGCP2Q9BSJ2 902 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 BCAS3Q9H6U6 928 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 TCEAL9Q9UHQ7 104 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 TRAF3IP3Q9Y228 551 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 DOCK5Q9H7D0 1870 aa15.55■□□□□ 0.08
CLK3-204ENST00000483723 A0A1W2PQC6 194 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 B4DLN1 442 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 BTBD19C9JJ37 291 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 FAM13AO94988 1023 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 STBD1O95210 358 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 ATG7O95352 703 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 ZBTB48P10074 688 aaPredicted RBP15.54■□□□□ 0.08
CLK3-204ENST00000483723 KCNJ6P48051 423 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 CASP5P51878 434 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 SP2Q02086 613 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 MAPK7Q13164 816 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 EDRF1Q3B7T1 1238 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 CST9Q5W186 159 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 PADI6Q6TGC4 694 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 ABHD15Q6UXT9 468 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 MORC4Q8TE76 937 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 BRI3BPQ8WY22 251 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 CEP63Q96MT8 703 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 ZHX3Q9H4I2 956 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 GPBP1L1Q9HC44 474 aaPredicted RBP15.54■□□□□ 0.08
CLK3-204ENST00000483723 KCND1Q9NSA2 647 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 SLC9A2Q9UBY0 812 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 CCL15-CCL14A0A0B4J2E2 113 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 PDHXO00330 501 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 EIF3DO15371 548 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLK3-204ENST00000483723 DKC1O60832 514 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLK3-204ENST00000483723 YWHABP31946 246 aaKnown RBP15.54■□□□□ 0.08
CLK3-204ENST00000483723 DNM2P50570 870 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 C1QTNF8P60827 252 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 CCL15Q16663 113 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 KNOP1Q1ED39 458 aaKnown RBP15.54■□□□□ 0.08
CLK3-204ENST00000483723 TC2NQ8N9U0 490 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 TIPINQ9BVW5 301 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 STRA6Q9BX79 667 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 PARVGQ9HBI0 331 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 JPH1Q9HDC5 661 aaPredicted RBP15.54■□□□□ 0.08
CLK3-204ENST00000483723 NMRK2Q9NPI5 230 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 TRPM7Q96QT4 1865 aa15.54■□□□□ 0.08
CLK3-204ENST00000483723 MYH11P35749 1972 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 SFI1A8K8P3 1242 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 PDXKO00764 312 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 PSAPP07602 524 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 TGFB3P10600 412 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 CYP2C8P10632 490 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 MAPTP10636 758 aaKnown RBP15.53■□□□□ 0.08
CLK3-204ENST00000483723 MARSP56192 900 aaKnown RBP15.53■□□□□ 0.08
CLK3-204ENST00000483723 ACTR2P61160 394 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 MIIPQ5JXC2 388 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 DAW1Q8N136 415 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 CCDC112Q8NEF3 446 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 MMP19Q99542 508 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 MORF4L1Q9UBU8 362 aa15.53■□□□□ 0.08
CLK3-204ENST00000483723 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.53■□□□□ 0.083e-7■■■□□ 15.1
CLK3-204ENST00000483723 MYBP10242 640 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 GCLCP48506 637 aaPredicted RBP15.52■□□□□ 0.08
CLK3-204ENST00000483723 UBXN1Q04323 297 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 KCTD2Q14681 263 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 ZNF720Q7Z2F6 126 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 TMEM139Q8IV31 216 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 MYCT1Q8N699 235 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 GPRC5AQ8NFJ5 357 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 MRPL44Q9H9J2 332 aaKnown RBP15.52■□□□□ 0.08
CLK3-204ENST00000483723 POLD4Q9HCU8 107 aa15.52■□□□□ 0.08
CLK3-204ENST00000483723 UBE4BO95155 1302 aa15.52■□□□□ 0.07
CLK3-204ENST00000483723 ZNF862O60290 1169 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 HIP1RO75146 1068 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 PRPF6O94906 941 aaKnown RBP15.51■□□□□ 0.07
CLK3-204ENST00000483723 GNA14O95837 355 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 MTIF2P46199 727 aaKnown RBP15.51■□□□□ 0.07
CLK3-204ENST00000483723 RBL2Q08999 1139 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 NFIL3Q16649 462 aa15.51■□□□□ 0.07
CLK3-204ENST00000483723 SEPT14Q6ZU15 432 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms