RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 KLRC3Q07444 240 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 SEMA3FQ13275 785 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 AOC3Q16853 763 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 ASTE1Q2TB18 679 aaPredicted RBP16.7■□□□□ 0.26
DDR1-244ENST00000482873 SPATS2Q86XZ4 545 aaKnown RBP16.7■□□□□ 0.26
DDR1-244ENST00000482873 CCT8L2Q96SF2 557 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 THSD7AQ9UPZ6 1657 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 MEIS2O14770 477 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 ONECUT3O60422 494 aaPredicted RBP16.7■□□□□ 0.26
DDR1-244ENST00000482873 NPR1P16066 1061 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 PPARDQ03181 441 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
DDR1-244ENST00000482873 EMC10Q5UCC4 262 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 YTHDF3Q7Z739 585 aaKnown RBP16.7■□□□□ 0.26
DDR1-244ENST00000482873 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 BAP1Q92560 729 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 TBC1D5Q92609 795 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 NOX5Q96PH1 765 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 TSG101Q99816 390 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
DDR1-244ENST00000482873 CD248Q9HCU0 757 aa16.7■□□□□ 0.26
DDR1-244ENST00000482873 RSPH10B2B2RC85 870 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 FAM86B1E9PN63 330 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 ZBTB39O15060 712 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 GH2P01242 217 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 FAM86B2P0C5J1 330 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 RSPH10BP0C881 870 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 ACTN1P12814 892 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 PAK2Q13177 524 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 TRMT1LQ7Z2T5 733 aaKnown RBP16.69■□□□□ 0.26
DDR1-244ENST00000482873 NLRP14Q86W24 1093 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 CASKIN2Q8WXE0 1202 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDR1-244ENST00000482873 BMP2KQ9NSY1 1161 aaPredicted RBP16.69■□□□□ 0.26
DDR1-244ENST00000482873 CHMP2AO43633 222 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 KIF1CO43896 1103 aaKnown RBP16.69■□□□□ 0.26
DDR1-244ENST00000482873 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
DDR1-244ENST00000482873 ARSHQ5FYA8 562 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 RNF187Q5TA31 235 aaPredicted RBP16.69■□□□□ 0.26
DDR1-244ENST00000482873 CATSPER3Q86XQ3 398 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 IQCDQ96DY2 449 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 ATP6V1G3Q96LB4 118 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 RGL1Q9NZL6 768 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
DDR1-244ENST00000482873 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
DDR1-244ENST00000482873 COL4A3BPQ9Y5P4 624 aa16.69■□□□□ 0.26
DDR1-244ENST00000482873 PLIN4Q96Q06 1357 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 CLRN2A0PK11 232 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 hCG_1984214I3L0E3 225 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 ECE2O60344 883 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 CYP11B2P19099 503 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 ECE1P42892 770 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 ARHGAP4P98171 946 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 KCNA1Q09470 495 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 IFT88Q13099 833 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 HGSNATQ68CP4 663 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 CD302Q8IX05 232 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 MREGQ8N565 214 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 ZNF713Q8N859 430 aaPredicted RBP16.68■□□□□ 0.26
DDR1-244ENST00000482873 KRT12Q99456 494 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 MYH7BA7E2Y1 1941 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 FTCDO95954 541 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 APBA3O96018 575 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
DDR1-244ENST00000482873 EHHADHQ08426 723 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 ITGB3BPQ13352 177 aaPredicted RBP16.68■□□□□ 0.26
DDR1-244ENST00000482873 ADAM9Q13443 819 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 MICALCLQ6ZW33 695 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 PIGOQ8TEQ8 1089 aa16.68■□□□□ 0.26
DDR1-244ENST00000482873 A0A1W2PRG0 241 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 TCP10L2B9ZVM9 353 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 NDUFB10O96000 172 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 POLD1P28340 1107 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 SETQ01105 290 aaPredicted RBP16.67■□□□□ 0.26
DDR1-244ENST00000482873 LRRC63Q05C16 580 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 RAPGEF1Q13905 1077 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
DDR1-244ENST00000482873 E7EVH7 732 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 CLIC2O15247 247 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 TLR2O60603 784 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 PALMO75781 387 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 ALDH1B1P30837 517 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 HPDP32754 393 aaPredicted RBP16.67■□□□□ 0.26
DDR1-244ENST00000482873 CEP85LQ5SZL2 805 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 KSR1Q8IVT5 923 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 CCDC13Q8IYE1 715 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 RNF10Q8N5U6 811 aaKnown RBP16.67■□□□□ 0.26
DDR1-244ENST00000482873 FAM133AQ8N9E0 248 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 PRMT6Q96LA8 375 aaPredicted RBP16.67■□□□□ 0.26
DDR1-244ENST00000482873 GOLPH3Q9H4A6 298 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 PI4KBQ9UBF8 816 aa16.67■□□□□ 0.26
DDR1-244ENST00000482873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDR1-244ENST00000482873 NOL4O94818 638 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms