RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 GJB2P29033 226 aa20.71■□□□□ 0.91
SMIM4-204ENST00000482728 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
SMIM4-204ENST00000482728 TRAPPC12Q8WVT3 735 aa20.71■□□□□ 0.91
SMIM4-204ENST00000482728 BBXQ8WY36 941 aaPredicted RBP20.71■□□□□ 0.91
SMIM4-204ENST00000482728 FAM167AQ96KS9 214 aa20.71■□□□□ 0.91
SMIM4-204ENST00000482728 SCN5AQ14524 2016 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 H3BQV1 296 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 RPLP2P05387 115 aaKnown RBP20.7■□□□□ 0.9
SMIM4-204ENST00000482728 CTSHP09668 335 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 ATP4AP20648 1035 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 CALCRLQ16602 461 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 RUFY4Q6ZNE9 571 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 NOSTRINQ8IVI9 506 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 DNAJB3Q8WWF6 145 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 HAS1Q92839 578 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 VWCEQ96DN2 955 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 PCDHA2Q9Y5H9 948 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 SLC4A7Q9Y6M7 1214 aa20.7■□□□□ 0.9
SMIM4-204ENST00000482728 NEMFO60524 1076 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 NBNO60934 754 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 KLRC1P26715 233 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 SMAD3P84022 425 aaKnown RBP20.69■□□□□ 0.9
SMIM4-204ENST00000482728 PPP2R5CQ13362 524 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 RASIP1Q5U651 963 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 MCTP1Q6DN14 999 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 B3GNT9Q6UX72 402 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 RPAINQ86UA6 219 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 FAM49AQ9H0Q0 323 aaPredicted RBP20.69■□□□□ 0.9
SMIM4-204ENST00000482728 CXXC1Q9P0U4 656 aaPredicted RBP20.69■□□□□ 0.9
SMIM4-204ENST00000482728 NOL7Q9UMY1 257 aaKnown RBP20.69■□□□□ 0.9
SMIM4-204ENST00000482728 PCDHA12Q9UN75 941 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 CEP131Q9UPN4 1083 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 TET1Q8NFU7 2136 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 COL1A2P08123 1366 aa20.69■□□□□ 0.9
SMIM4-204ENST00000482728 CXCL10P02778 98 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 MCM7P33993 719 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 GPNMBQ14956 572 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 GPR153Q6NV75 609 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 TRAF7Q6Q0C0 670 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 MTHFD1LQ6UB35 978 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 ZBTB10Q96DT7 871 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 VAV3Q9UKW4 847 aa20.68■□□□□ 0.9
SMIM4-204ENST00000482728 ZNF862O60290 1169 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 OATP04181 439 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 U2AF2P26368 475 aaKnown RBP eCLIP20.67■□□□□ 0.93e-6■■■■□ 23.8
SMIM4-204ENST00000482728 PRKCEQ02156 737 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 MBTPS1Q14703 1052 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 FAM26DQ5JW98 314 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 IER5Q5VY09 327 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 LARP1BQ659C4 914 aaKnown RBP20.67■□□□□ 0.9
SMIM4-204ENST00000482728 CNKSR3Q6P9H4 555 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 IGSF9BQ9UPX0 1349 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 LAMA3Q16787 3333 aa20.67■□□□□ 0.9
SMIM4-204ENST00000482728 SMIM35A0A1B0GVV1 85 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 M0QZ92 97 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 EML1O00423 815 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 DKC1O60832 514 aaKnown RBP eCLIP20.66■□□□□ 0.9
SMIM4-204ENST00000482728 BAIAP3O94812 1187 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 TXKP42681 527 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 TRAPPC10P48553 1259 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 PSMC5P62195 406 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 IKBKEQ14164 716 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 ZNF174Q15697 407 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 UGCGQ16739 394 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 XKR3Q5GH77 459 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 NCAPH2Q6IBW4 605 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 NME8Q8N427 588 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 METTL13Q8N6R0 699 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 BANK1Q8NDB2 785 aa20.66■□□□□ 0.9
SMIM4-204ENST00000482728 TTC12Q9H892 705 aaPredicted RBP20.66■□□□□ 0.9
SMIM4-204ENST00000482728 TANC1Q9C0D5 1861 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 ABHD14A-ACY1A0A1B0GW23 586 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 DDX11L8A8MPP1 907 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 KIF28PB7ZC32 967 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 WNT7AO00755 349 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 MAGEB2O15479 319 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 CHRNA1P02708 482 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 P4HBP07237 508 aaKnown RBP20.65■□□□□ 0.9
SMIM4-204ENST00000482728 QARSP47897 775 aaKnown RBP20.65■□□□□ 0.9
SMIM4-204ENST00000482728 KCNJ6P48051 423 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 MRPS6P82932 125 aaKnown RBP20.65■□□□□ 0.9
SMIM4-204ENST00000482728 ORC2Q13416 577 aaPredicted RBP20.65■□□□□ 0.9
SMIM4-204ENST00000482728 CUL4AQ13619 759 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 EPHA7Q15375 998 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 TTC38Q5R3I4 469 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 SEPT8Q92599 483 aa20.65■□□□□ 0.9
SMIM4-204ENST00000482728 GRXCR1A8MXD5 290 aa20.64■□□□□ 0.89
SMIM4-204ENST00000482728 EFCAB14O75071 495 aa20.64■□□□□ 0.89
SMIM4-204ENST00000482728 ATP2A2P16615 1042 aaKnown RBP20.64■□□□□ 0.89
SMIM4-204ENST00000482728 FAM109BQ6ICB4 259 aaPredicted RBP20.64■□□□□ 0.89
SMIM4-204ENST00000482728 DBF4BQ8NFT6 615 aa20.64■□□□□ 0.89
SMIM4-204ENST00000482728 MTMR9Q96QG7 549 aa20.64■□□□□ 0.89
SMIM4-204ENST00000482728 SEPT9Q9UHD8 586 aaPredicted RBP20.64■□□□□ 0.89
SMIM4-204ENST00000482728 MSRAQ9UJ68 235 aa20.64■□□□□ 0.89
SMIM4-204ENST00000482728 CDY2AQ9Y6F7 541 aa20.64■□□□□ 0.89
SMIM4-204ENST00000482728 WDR81Q562E7 1941 aa20.64■□□□□ 0.89
SMIM4-204ENST00000482728 TMOD1P28289 359 aa20.63■□□□□ 0.89
SMIM4-204ENST00000482728 TMEM62Q0P6H9 643 aa20.63■□□□□ 0.89
SMIM4-204ENST00000482728 PLEKHG4Q58EX7 1191 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms