RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 LMBR1Q8WVP7 490 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.82■□□□□ 0.28
C9orf3-218ENST00000482056 FEZ2Q9UHY8 353 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-218ENST00000482056 FBXL5Q9UKA1 691 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 EYA4O95677 639 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 MMP14P50281 582 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 DNA2P51530 1060 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 PSMC6P62333 389 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 PTK2Q05397 1052 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 ABCB5Q2M3G0 1257 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 USH1GQ495M9 461 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 DCAF17Q5H9S7 520 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-218ENST00000482056 TATDN1Q6P1N9 297 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 IRF2BP2Q7Z5L9 587 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 TEX2Q8IWB9 1127 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 WHAMMQ8TF30 809 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 CAPS2Q9BXY5 557 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 EPB41L5Q9HCM4 733 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
C9orf3-218ENST00000482056 NR3C1P04150 777 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 MYBP10242 640 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 SLC9A1P19634 815 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 PON1P27169 355 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 PRKCIP41743 596 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 MRPS25P82663 173 aaKnown RBP16.81■□□□□ 0.28
C9orf3-218ENST00000482056 GUCY2DQ02846 1103 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 SLC20A2Q08357 652 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 CFAP58Q5T655 872 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 TCERG1LQ5VWI1 586 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 NLGN1Q8N2Q7 840 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 INPP4AQ96PE3 977 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-218ENST00000482056 KRT12Q99456 494 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 PACSIN1Q9BY11 444 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 FAM107BQ9H098 131 aa16.81■□□□□ 0.28
C9orf3-218ENST00000482056 DDTLA6NHG4 134 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 FAM196BA6NMK8 535 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 GCNT3O95395 438 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 BMP3P12645 472 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 ACTN1P12814 892 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 NOP2P46087 812 aaKnown RBP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 DNAJC21Q5F1R6 531 aaKnown RBP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 ZNF571Q7Z3V5 609 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 MREGQ8N565 214 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 IFT81Q8WYA0 676 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 LENG9Q96B70 501 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 NRXN2Q9P2S2 1712 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 GTPBP10A4D1E9 387 aaKnown RBP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 FAM86B1E9PN63 330 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 EIF3DO15371 548 aaKnown RBP eCLIP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 MSH4O15457 936 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 NDUFB10O96000 172 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 GLI1P08151 1106 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 CYP3A4P08684 503 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 FAM86B2P0C5J1 330 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 EPHA7Q15375 998 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 STRIP1Q5VSL9 837 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 ALKBH5Q6P6C2 394 aaKnown RBP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 KIAA0825Q8IV33 1275 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 TSEN2Q8NCE0 465 aaKnown RBP16.8■□□□□ 0.28
C9orf3-218ENST00000482056 MASTLQ96GX5 879 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 BHMT2Q9H2M3 363 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 OLFML3Q9NRN5 406 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 NAGPAQ9UK23 515 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 INTUQ9ULD6 942 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 NFU1Q9UMS0 254 aa16.8■□□□□ 0.28
C9orf3-218ENST00000482056 KCNK3O14649 394 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 AKAP3O75969 853 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 FAM13AO94988 1023 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 KIF4AO95239 1232 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 FERP16591 822 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 CARSP49589 748 aaKnown RBP16.79■□□□□ 0.28
C9orf3-218ENST00000482056 CACNB3P54284 484 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 FOXR1Q6PIV2 292 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 FMNL3Q8IVF7 1028 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 C10orf67Q8IYJ2 551 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 SYCE1Q8N0S2 351 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 EIF1ADQ8N9N8 165 aaKnown RBP16.79■□□□□ 0.28
C9orf3-218ENST00000482056 EIF2AK1Q9BQI3 630 aaKnown RBP16.79■□□□□ 0.28
C9orf3-218ENST00000482056 DBNDD1Q9H9R9 158 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 TUFT1Q9NNX1 390 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 LCMT1Q9UIC8 334 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 VAV3Q9UKW4 847 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 TRPC5Q9UL62 973 aaPredicted RBP16.79■□□□□ 0.28
C9orf3-218ENST00000482056 SYNPO2Q9UMS6 1093 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 ASTN1O14525 1302 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 AFF2P51816 1311 aa16.79■□□□□ 0.28
C9orf3-218ENST00000482056 A0A0A6YYK5 440 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-218ENST00000482056 SHTN1A0MZ66 631 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 GFPT2O94808 682 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 HOXD13P35453 343 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 IRAK1P51617 712 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 CYP4A11Q02928 519 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 RBM26Q5T8P6 1007 aaKnown RBP16.78■□□□□ 0.28
C9orf3-218ENST00000482056 DPY19L2P1Q6NXN4 242 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 BTNL9Q6UXG8 535 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 STXBP4Q6ZWJ1 553 aa16.78■□□□□ 0.28
C9orf3-218ENST00000482056 SIAH1Q8IUQ4 282 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms