RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 PDCD2LQ9BRP1 358 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 KLF16Q9BXK1 252 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-253ENST00000481849 HDAC6Q9UBN7 1215 aa10.42□□□□□ -0.74
HLA-B-253ENST00000481849 GCOM1H8Y6P7 765 aaPredicted RBP10.41□□□□□ -0.74
HLA-B-253ENST00000481849 ARHGEF15O94989 841 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 GGPS1O95749 300 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 POLR2MP0CAP2 368 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 GMPRP36959 345 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 CLK2P49760 499 aaKnown RBP10.41□□□□□ -0.74
HLA-B-253ENST00000481849 ZNF200P98182 395 aaPredicted RBP10.41□□□□□ -0.74
HLA-B-253ENST00000481849 LAMC2Q13753 1193 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 PGM5Q15124 567 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 SKIV2LQ15477 1246 aaKnown RBP10.41□□□□□ -0.74
HLA-B-253ENST00000481849 KIAA0753Q2KHM9 967 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 STOX1Q6ZVD7 989 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 NCOA7Q8NI08 942 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 DHX38Q92620 1227 aaKnown RBP10.41□□□□□ -0.74
HLA-B-253ENST00000481849 MTMR8Q96EF0 704 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 SPATA33Q96N06 139 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 CTAGE1Q96RT6 745 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 MYL10Q9BUA6 226 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 MAF1Q9H063 256 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 ZFAND3Q9H8U3 227 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 GTF2IRD1Q9UHL9 959 aa10.41□□□□□ -0.74
HLA-B-253ENST00000481849 H3BM21 787 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 SGSM2O43147 1006 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 CYTH3O43739 400 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 UPP2O95045 317 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 SELPP16109 830 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 CCND2P30279 289 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 KCNJ6P48051 423 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 SART3Q15020 963 aaKnown RBP10.4□□□□□ -0.74
HLA-B-253ENST00000481849 LRRC8DQ7L1W4 858 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 CATIPQ7Z7H3 387 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 HERC6Q8IVU3 1022 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 CAGE1Q8TC20 777 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 AFAP1L1Q8TED9 768 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 ARNTL2Q8WYA1 636 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 ITPKCQ96DU7 683 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 SLC9A7Q96T83 725 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 KATNAL1Q9BW62 490 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 KCNH6Q9H252 994 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 RIOX1Q9H6W3 641 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 MLXIPQ9HAP2 919 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 RTEL1Q9NZ71 1219 aa10.4□□□□□ -0.74
HLA-B-253ENST00000481849 RBM8AQ9Y5S9 174 aaKnown RBP10.4□□□□□ -0.74
HLA-B-253ENST00000481849 PNMA6FA0A0J9YX94 578 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 FAM181BA6NEQ2 426 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 KIF28PB7ZC32 967 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 CKBP12277 381 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 UBA1P22314 1058 aaKnown RBP10.39□□□□□ -0.75
HLA-B-253ENST00000481849 GRM5P41594 1212 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 ANTXR2P58335 489 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 DEFB103AP81534 67 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 SP2Q02086 613 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 TROAPQ12815 778 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 GPNMBQ14956 572 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 TCTN1Q2MV58 587 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 HSDL1Q3SXM5 330 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 CELF3Q5SZQ8 465 aaKnown RBP10.39□□□□□ -0.75
HLA-B-253ENST00000481849 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 KRT40Q6A162 431 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 FAM117BQ6P1L5 589 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 SPRED2Q7Z698 418 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 VSIG10LQ86VR7 867 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 SESTD1Q86VW0 696 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 RAB11FIP4Q86YS3 637 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 PHOSPHO2Q8TCD6 241 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 WNT8BQ93098 351 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 BCAS3Q9H6U6 928 aa10.39□□□□□ -0.75
HLA-B-253ENST00000481849 DNAH14Q0VDD8 3507 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 FAM186AA6NE01 2351 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 LAMA4Q16363 1823 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 GCN1Q92616 2671 aaKnown RBP10.38□□□□□ -0.75
HLA-B-253ENST00000481849 LCHNA4D1U4 455 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 SOBPA7XYQ1 873 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 NBNO60934 754 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 BAIAP3O94812 1187 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 F2P00734 622 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 RXRAP19793 462 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 WDR5P61964 334 aaKnown RBP10.38□□□□□ -0.75
HLA-B-253ENST00000481849 SP4Q02446 784 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 GHRHRQ02643 423 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 TFF2Q03403 129 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 TAP1Q03518 808 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 TRAF1Q13077 416 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 PTK7Q13308 1070 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 ZNF618Q5T7W0 954 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 KCNV1Q6PIU1 500 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 NFXL1Q6ZNB6 911 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 MB21D2Q8IYB1 491 aaPredicted RBP10.38□□□□□ -0.75
HLA-B-253ENST00000481849 CMTR1Q8N1G2 835 aaKnown RBP10.38□□□□□ -0.75
HLA-B-253ENST00000481849 SMARCC2Q8TAQ2 1214 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 MAP3K20Q9NYL2 800 aaKnown RBP10.38□□□□□ -0.75
HLA-B-253ENST00000481849 MTUS1Q9ULD2 1270 aa10.38□□□□□ -0.75
HLA-B-253ENST00000481849 CHD9Q3L8U1 2897 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms