RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 CEP135Q66GS9 1140 aa30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 EPM2AIP1Q7L775 607 aaPredicted RBP30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 CEP63Q96MT8 703 aa30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 PANX2Q96RD6 677 aa30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 SENP7Q9BQF6 1050 aa30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 POLD4Q9HCU8 107 aa30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 SEL1LQ9UBV2 794 aa30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 LCTP09848 1927 aa30.77■■■□□ 2.52
TNFRSF25-213ENST00000480393 MFAP3LO75121 409 aa30.76■■■□□ 2.52
TNFRSF25-213ENST00000480393 RGS20O76081 388 aa30.76■■■□□ 2.52
TNFRSF25-213ENST00000480393 KCNA2P16389 499 aa30.76■■■□□ 2.52
TNFRSF25-213ENST00000480393 ALDH5A1P51649 535 aaPredicted RBP30.76■■■□□ 2.52
TNFRSF25-213ENST00000480393 FKBP15Q5T1M5 1219 aa30.76■■■□□ 2.52
TNFRSF25-213ENST00000480393 PADI6Q6TGC4 694 aa30.76■■■□□ 2.52
TNFRSF25-213ENST00000480393 ZNF507Q8TCN5 953 aa30.76■■■□□ 2.52
TNFRSF25-213ENST00000480393 NFASCO94856 1347 aa30.76■■■□□ 2.51
TNFRSF25-213ENST00000480393 SFI1A8K8P3 1242 aa30.76■■■□□ 2.51
TNFRSF25-213ENST00000480393 GYPCP04921 128 aa30.76■■■□□ 2.51
TNFRSF25-213ENST00000480393 ERCC3P19447 782 aa30.76■■■□□ 2.51
TNFRSF25-213ENST00000480393 CASP14P31944 242 aa30.76■■■□□ 2.51
TNFRSF25-213ENST00000480393 GPAT2Q6NUI2 795 aa30.76■■■□□ 2.51
TNFRSF25-213ENST00000480393 ARHGAP6O43182 974 aa30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 UGCGQ16739 394 aa30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 KNOP1Q1ED39 458 aaKnown RBP30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 EDRF1Q3B7T1 1238 aa30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 CCDC40Q4G0X9 1142 aa30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 C4orf19Q8IY42 314 aa30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 SMAP1Q8IYB5 467 aaPredicted RBP30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 CCAR2Q8N163 923 aaKnown RBP30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 CCDC51Q96ER9 411 aa30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 JPH1Q9HDC5 661 aaPredicted RBP30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 PCDHA10Q9Y5I2 948 aa30.75■■■□□ 2.51
TNFRSF25-213ENST00000480393 SPATA31C2B4DYI2 1134 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 STX10O60499 249 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 EIF3JO75822 258 aaKnown RBP30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 PRPF6O94906 941 aaKnown RBP30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 YWHABP31946 246 aaKnown RBP30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 TBC1D8BQ0IIM8 1120 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 MAN2A1Q16706 1144 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 BMT2Q1RMZ1 405 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 MIIPQ5JXC2 388 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 STXBP4Q6ZWJ1 553 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 TMEM139Q8IV31 216 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 KCND1Q9NSA2 647 aa30.74■■■□□ 2.51
TNFRSF25-213ENST00000480393 CALUO43852 315 aaPredicted RBP30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 GNA14O95837 355 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 ZNF131P52739 623 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 TRMT1Q9NXH9 659 aaKnown RBP30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 SLC9A2Q9UBY0 812 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 PNMA3Q9UL41 463 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 EIF3DO15371 548 aaKnown RBP eCLIP30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 HIP1RO75146 1068 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 RARRES1P49788 294 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 VWA3BQ502W6 1294 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 TXNRD2Q9NNW7 524 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 RBPJLQ9UBG7 517 aa30.73■■■□□ 2.51
TNFRSF25-213ENST00000480393 ASTN1O14525 1302 aa30.72■■■□□ 2.51
TNFRSF25-213ENST00000480393 USP27XA6NNY8 438 aa30.72■■■□□ 2.51
TNFRSF25-213ENST00000480393 CCP110O43303 1012 aa30.72■■■□□ 2.51
TNFRSF25-213ENST00000480393 PSAPP07602 524 aa30.72■■■□□ 2.51
TNFRSF25-213ENST00000480393 C16orf45Q96MC5 204 aaPredicted RBP30.72■■■□□ 2.51
TNFRSF25-213ENST00000480393 PCMTD1Q96MG8 357 aaPredicted RBP30.72■■■□□ 2.51
TNFRSF25-213ENST00000480393 NAA15Q9BXJ9 866 aaKnown RBP30.72■■■□□ 2.51
TNFRSF25-213ENST00000480393 UBE4BO95155 1302 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 CETN3O15182 167 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 DKC1O60832 514 aaKnown RBP eCLIP30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 FXR1P51114 621 aaKnown RBP eCLIP30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 FKBP1BP68106 108 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 ODR4Q5SWX8 454 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 E4F1Q66K89 784 aaPredicted RBP30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 FAM178BQ8IXR5 827 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 ATP6V0A1Q93050 837 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 MPHOSPH6Q99547 160 aaKnown RBP30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 BCAS3Q9H6U6 928 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 RRAGCQ9HB90 399 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 TYW1Q9NV66 732 aaKnown RBP30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 TRAF3IP3Q9Y228 551 aa30.71■■■□□ 2.51
TNFRSF25-213ENST00000480393 PDXKO00764 312 aa30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 USO1O60763 962 aaKnown RBP30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 NMT1P30419 496 aaKnown RBP30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 ICAM3P32942 547 aa30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 ZC3H3Q8IXZ2 948 aaKnown RBP30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 NDST4Q9H3R1 872 aa30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 GBA2Q9HCG7 927 aaPredicted RBP30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 ANKEF1Q9NU02 776 aa30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 KIAA1217Q5T5P2 1943 aa30.7■■■□□ 2.51
TNFRSF25-213ENST00000480393 SOWAHBA6NEL2 793 aa30.7■■■□□ 2.5
TNFRSF25-213ENST00000480393 SP4Q02446 784 aa30.7■■■□□ 2.5
TNFRSF25-213ENST00000480393 ADAM9Q13443 819 aa30.7■■■□□ 2.5
TNFRSF25-213ENST00000480393 SYCP1Q15431 976 aa30.7■■■□□ 2.5
TNFRSF25-213ENST00000480393 SEPT14Q6ZU15 432 aa30.7■■■□□ 2.5
TNFRSF25-213ENST00000480393 GTF3C2Q8WUA4 911 aaPredicted RBP30.7■■■□□ 2.5
TNFRSF25-213ENST00000480393 GABBR1Q9UBS5 961 aa30.7■■■□□ 2.5
TNFRSF25-213ENST00000480393 SRCAPQ6ZRS2 3230 aa30.69■■■□□ 2.5
TNFRSF25-213ENST00000480393 CETPP11597 493 aa30.69■■■□□ 2.5
TNFRSF25-213ENST00000480393 NR2F2P24468 414 aa30.69■■■□□ 2.5
TNFRSF25-213ENST00000480393 KCTD2Q14681 263 aa30.69■■■□□ 2.5
TNFRSF25-213ENST00000480393 XKR9Q5GH70 373 aa30.69■■■□□ 2.5
TNFRSF25-213ENST00000480393 FAM133AQ8N9E0 248 aa30.69■■■□□ 2.5
TNFRSF25-213ENST00000480393 MMP19Q99542 508 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms